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Name : clpB (Arad_7925) Accession : YP_002540916.1 Strain : Genome accession: NC_011983 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 822458 - 825070 bp Length : 2613 bp Strand : + Note : - DNA sequence : ATGAACGCGGAAAAATATACAGATCGTGCAAGAGGCTTCATCCAATCCGCGCAGTCGCTTGCCACGCGGGAGGGAAACCA GCAATTTACACCTCTCCATATTCTGAAAGTTCTGCTTGATGACAGCGAGGGTCTTGCCGGTGGCCTGATCGACCGCTCGG GCGGCAATTCGCGTGCGATCCTCAGCTCGACCGAAGACGCCTTGGTAAAATTGCCGAAGGTGACGGGTGCCGGGGCCGGA CAAGTCTATCTCGCGCCCGAAACCGCGCGCCTCTTTACGGCCGCGGAACAGGCAGCGGAAAAAGCAGGCGATAGCTTCGT GACGGTGGAACGGCTGTTGCAGGCGCTTGTCGCCGACAAGCACGGCGAAGCCGGAAAACTTCTCGCACAGGGAGGCGTTA ATCCGCAACAGCTCAACGCGGCCATCAACGCCTTGCGCAAGGGTCGCACCGCCGATAGTGCCTCGGCTGAAAACGCTTAT GACGCGCTGAAGAAATATGCTCGCGATCTGACGCAGGCGGCGCGGGACAGCAAGCTCGATCCCGTCATCGGACGCGACGA GGAAATCCGCCGCACGATCCAGGTCCTTTCGCGGCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCAGGTGTCGGCA AAACTGCCATCGTCGAAGGGCTGGCATTGCGGATCGTCAACGGCGACGTACCGGAAAGCCTGAAGGATAAAAAGCTGCTC GCGCTCGATCTCGGTGCGCTGATCGCCGGCGCGAAATATCGCGGAGAATTTGAGGAACGTCTGAAAGCCGTGCTGCAGGA AGTTACCTCCGCTGCGGGCGGGATTATCCTGTTCATCGATGAGATGCATACGCTGATCGGCGCCGGAAAAACCGACGGCG CAATGGATGCGTCCAATCTGCTGAAGCCGGCCCTGGCGCGGGGCGAGCTGCATTGCGTCGGGGCCACCACGCTCGACGAA TACCGCAAGCATGTCGAGAAGGATCCGGCGCTTGCGCGGCGGTTCCAGCCGGTGTTCGTGCCGGAGCCGACGGTCGAGGA TACGATCTCGATCCTGCGCGGGCTGAAGGAGAAATACGAACTCCATCACGGGATCCGGATCGCCGATTCCGCCTTGGTGG CGGCTGCGACGCTGTCAAACCGCTACATCACGGACCGCTTCCTCCCCGACAAGGCCATCGACCTGATGGACGAGGCCGCG GCCCGGTTGAAGATGCAGGTCGATTCCAAGCCGGAGGAGCTGGACTCTCTCGACCGTGAGATCATACGGCGCAAGATCGA GCAGGAGGCGCTCAAGAAGGAAGCGGATGCCGGTTCCAAGAGCCGGCTGAAGACGCTCGGCGAGGAATTGACCAGGCTGG AAAAGGCGTCGGCCGATTTGACCTCGAAATGGCAGTCGGAGAAGGGCAAGCTCTCCGACGCCCAGAAGATGAGGAGCGAG CTGGAACAGTTTCGCACCGAACTCGCCAATGCCCAGCGCTCCGGTGAATATCAGCGGGCTGGCGAGCTTGCCTACAGCAC GATCCCGGAGCTTGAGAAGAAACTCGCCGCCGTCGAAGCCAGCGAGAATTCCTCGATCACCGAAACGGTGACGGCCGACA ATATCGCGCAGGTGGTGTCGCGCTGGACAGGCGTGCCGGTCGACAAGATGCTCGAGGGCGAGAAGGATAAGCTTCTTCAT ATGGAAGAGATGCTTGGCAAGCGCGTCGTCGGCCAGGCGCAGGCCGTGCGCGCTGTGTCGACCGCCGTCCGGCGCGCCCG TGCCGGGCTGCAGGACCCCAGCCGCCCGATCGGCTCGTTCATGTTTCTGGGTCCCACTGGCGTCGGTAAGACCGAGCTTG CAAAGGCGCTGGCGGAGTTCATGTTCGATGATGAAACGGCGATGGTGCGTATCGACATGTCGGAGTTCATGGAGAAGCAT TCCGTCGCGCGGTTGATCGGCGCTCCTCCGGGATATGTCGGCTATGACGAGGGTGGTGTGCTGACCGAAGCCGTGCGGCG GCGGCCCTATCAGGTCGTGCTCTTCGATGAGATCGAAAAGGCGCATCCGGACGTGTTCAACGTCCTGCTGCAGGTTCTCG ACGACGGCCGCCTGACCGACGGTCAAGGTCGCACAGTCGACTTCCGCAACACGCTAATCATCATGACCTCGAACATCGGC GCGGAATATCTCGTAAACCAGCCGGAAGGCGAAAAGACAAGCATGGTGCGCGGTGAGGTCATGACGATGGTGCGCGCGCA TCTCCGTCCGGAGTTTCTCAACCGCATCGACGCCATCATCCTGTTTCACCGGTTGCAGAAGAGTGAAATGGGGCAGATCG TCGAAATTCAGTTCGCGCGATTGCGGAAAATCCTGGATGATCGCAAGATCGAGCTTACGCTCGATGCGAAGGGGAGGACC TGGCTTGCCGACAAAGGGTGGGATCCTGCCTATGGCGCCCGTCCGTTGAAGCGCGTGATCCAGCGCTACGTACAGGACCC GCTGGCGGAAATGATCCTTGCGGGCGATGTGCGTGACGGTTCAACGGTGAAGCTCTCCGCGGGCAAGGACGGCCTCACAT TCAATGGAAAGAAGCCGGTGATGGTGGAGGAAGACGATTTTGACCTCGTCTGA Protein sequence : MNAEKYTDRARGFIQSAQSLATREGNQQFTPLHILKVLLDDSEGLAGGLIDRSGGNSRAILSSTEDALVKLPKVTGAGAG QVYLAPETARLFTAAEQAAEKAGDSFVTVERLLQALVADKHGEAGKLLAQGGVNPQQLNAAINALRKGRTADSASAENAY DALKKYARDLTQAARDSKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLL ALDLGALIAGAKYRGEFEERLKAVLQEVTSAAGGIILFIDEMHTLIGAGKTDGAMDASNLLKPALARGELHCVGATTLDE YRKHVEKDPALARRFQPVFVPEPTVEDTISILRGLKEKYELHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSLDREIIRRKIEQEALKKEADAGSKSRLKTLGEELTRLEKASADLTSKWQSEKGKLSDAQKMRSE LEQFRTELANAQRSGEYQRAGELAYSTIPELEKKLAAVEASENSSITETVTADNIAQVVSRWTGVPVDKMLEGEKDKLLH MEEMLGKRVVGQAQAVRAVSTAVRRARAGLQDPSRPIGSFMFLGPTGVGKTELAKALAEFMFDDETAMVRIDMSEFMEKH SVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG AEYLVNQPEGEKTSMVRGEVMTMVRAHLRPEFLNRIDAIILFHRLQKSEMGQIVEIQFARLRKILDDRKIELTLDAKGRT WLADKGWDPAYGARPLKRVIQRYVQDPLAEMILAGDVRDGSTVKLSAGKDGLTFNGKKPVMVEEDDFDLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-96 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-97 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002540916.1 | ATP-dependent Clp protease | VFG0079 | Protein | 4e-150 | 47 |
| clpB | YP_002540916.1 | ATP-dependent Clp protease | VFG2076 | Protein | 1e-107 | 45 |
| clpB | YP_002540916.1 | ATP-dependent Clp protease | VFG2084 | Protein | 1e-104 | 43 |
