Gene Information

Name : nodW (Arad_8257)
Accession : YP_002541171.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : two-component nodulation response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1101494 - 1102108 bp
Length : 615 bp
Strand : -
Note : -

DNA sequence : 
ATGATCATGCCGGAGCAGAAACCGACCATTTATGTCATCGACGACGATCCCTCCGTCCGGGATGGGCTGGACAGCCTCCT
GCGCTCAGTCGGCTATGACGTCAGCAGCTTCGCATCGCCACGGGATTTCCTGAAACATCGACGATCCGACGGTCCGTCCT
GCCTTGTCCTCGACGTCAGGATGCCGGATGCAAGCGGCCTTGATTTCCAGGACGAGCTGGCAAGAACCGGCAATCCCCTG
CCCATCATATTCCTGACCGGCCACGGCGATGTGCCGATGTCCGTGAGGGCGATGAAGGCTGGTGCGGTGGAGTTTCTGCT
CAAGCCCTTTCGGGAACAGGATCTTCTCGACGCCATTCGGCAAGCTTTGGAAAAGGACCGCACCCGGCTTCGCCAGGACG
CTGCTACGACCGATTTGCGGGAGCGGTTTGCAACGCTGACGGCGCGCGAGCGTGAGGTGATGGCACTTGTCGCCCGCGGA
CGCCTCAACAAGCAGATCGCCGCCGAACTCGGCCTCAGCGAAATCACCGTCAAGGTCCATCGCGGCCAGGCGATGCGCAA
GATGCAGGCGGGGTCCGTCGCCGATCTCATCAGAATGGCCGACGCGCTCGGATAG

Protein sequence : 
MIMPEQKPTIYVIDDDPSVRDGLDSLLRSVGYDVSSFASPRDFLKHRRSDGPSCLVLDVRMPDASGLDFQDELARTGNPL
PIIFLTGHGDVPMSVRAMKAGAVEFLLKPFREQDLLDAIRQALEKDRTRLRQDAATTDLRERFATLTAREREVMALVARG
RLNKQIAAELGLSEITVKVHRGQAMRKMQAGSVADLIRMADALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-30 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-30 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-30 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-30 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nodW YP_002541171.1 two-component nodulation response regulator protein VFG0488 Protein 4e-31 41