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Name : clpB (Arad_4124) Accession : YP_002545837.1 Strain : Genome accession: NC_011985 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3298379 - 3300979 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGAATATTGAAAAATACTCCGAGCGCGTGCGCGGCTTTTTGCAGTCTGCGCAAACCAATGCATTGTCGCAAGGAAACCA GCAATTCACGCCTGAGCATGTGCTGAAGGTGCTTCTGGACGACGACCAGGGCATGGCTGCCTCGTTGATCGAGCGCGCTG GCGGCGATGCCAAGGCTGCGCGTCTCGCTAATGATGCCGCCCTTGCCAAGCTGCCGAAAGTGTCCGGCGGCGACGGCCAG GTCTATCTCTCGCAGCCGCTTGCCAAGGTCTTCACCACTGCCGAGGAGGCCTCCAAGAAGGCCGGCGACAGTTTCGTCAC GGTCGAGCGCCTGTTGCAGGCGCTGGCGATCGAATCGTCTGCGTCGACCTCGGCCACGCTGAAGAAGGCTGGCGTCACGC CGGCCGGGCTCAACCAGGTCATCAACGATATCCGCAAGGGCCGCACCGCCGATTCCGCCAACGCGGAGCAGGGCTTCGAT TCCCTGAAGAAGTATGCCCGCGATCTCACCGCCGAGGCCCGCGAGGGCAAGCTCGATCCGGTGATCGGACGTGACGACGA AATCCGCCGCACCATCCAGGTCCTCTCCCGCCGCACGAAGAACAACCCCGTGCTGATCGGCGAACCCGGCGTCGGCAAGA CGGCGATCGTCGAAGGCTTGGCGTTGCGCATCGTCAATGGTGACGTGCCGGAATCGCTGAAGGACAAGAAGCTGATGGCG CTCGACATGGGTGCCCTGATTGCCGGCGCGAAGTTTCGCGGCGAGTTCGAAGAGCGGCTGAAGGCCGTGCTCAACGAGGT GCAGTCGGAAAACGGCGAGATCATCCTGTTCATCGACGAGATGCACACGCTGGTCGGCGCCGGCAAGGCCGATGGCGCCA TGGACGCCTCCAACCTTCTGAAGCCCGCTCTTGCCCGCGGCGAGCTGCATTGCGTCGGCGCGACCACGCTTGACGAATAC CGCAAGCATGTCGAGAAGGATCCGGCGCTTGCCCGTCGTTTCCAGCCGGTCATGGTTGAAGAGCCGACGGTCGAGGACAC GATCTCGATCCTGCGCGGCCTGAAGGAAAAATACGAGCAGCACCACAAGGTCCGCATCGCCGATGCCGCCCTGGTGGCCG CCGCGACGCTTTCGAACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCCATCGACCTGATGGACGAGGCCGCCGCG CGGCTGCGCATGCAGGTGGATTCGAAGCCGGAAGAGCTCGACGAACTCGATCGTCGCATCATCCAACTGAAGATCGAGCG CGAAGCGCTGAAGAAGGAAACCGATCAGGCCTCCGCCGACCGGCTGAAGCGGCTGGAGACTGAGCTGACGTCGCTGGAAG AGGAAGCCGACGCACTGACCGCGCGCTGGCAGGCCGAAAAGCAGAAGCTCGGTCTTGCCGCCGATCTGAAGAAAAAGCTC GACGAGGCCCGCAACGAATTGGCCATTGCCCAGCGCAAGGGTGAGTTCCAGCGTGCCGGCGAGCTTGCCTATGGTGTGAT CCCGAATCTGGAGAAGGATCTTCAGACTGCTGAAGAGCAGGATGGCGGTCGCGATTCCATGGTGCAGGAAGTGGTCACCG CCGACAACATCGCCCATATCGTCTCCCGCTGGACCGGGATTCCCGTGGACAAGATGCTGGAAGGCGAGCGCGACAAGCTG CTGCGGATGGAAGACGAGCTGGCGAAGTGGGTCGTCGGTCAGGGCGATGCCGTTCAGGCGGTGTCGCGCGCCGTTCGCCG CTCGCGCGCCGGCCTGCAGGATCCGAACCGGCCGATCGGCTCGTTCATCTTTCTCGGCCCGACCGGTGTCGGCAAGACGG AGCTCACCAAGGCACTTGCCCGCTTCCTCTTCGACGATGATACGGCCATGGTACGCATGGACATGTCGGAATATATGGAG AAACACTCCGTTGCCCGGCTGATCGGTGCCCCTCCCGGCTATGTCGGCTATGAAGAAGGCGGCGCGCTCACCGAAGCCGT CCGCCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAAAAGGCGCATCCCGATGTCTTCAACATCTTGCTCCAGG TTCTGGATGACGGGCGGTTGACGGACGGACAGGGCCGCACGGTCGATTTCCGCAACACCATGATCATCATGACCTCGAAC CTCGGTGCTGAATACCTGACCCAGCTTAAGGAGGGTGATGACAGTGAACAGGTGCGCGAGCAGGTGATGGATGTGGTACG GGCGCATTTCCGGCCGGAATTCCTGAACCGTGTCGATGAGATCATCCTGTTCCATCGCCTGAAGCGCGAAGAGATGGGGG CGATCGTCGATATCCAGCTCGAGCGGTTACTGCAGTTGCTGTCCGAACGCAAGATCGCGCTCGAACTCGACGAGGATGCC CGCAACTGGCTCGCCAACAGGGGATATGATCCGGTCTATGGCGCAAGACCGCTGAAGCGGGTGATCCAGAAATACGTTCA GGATCCGCTCGCCGAGCAGATTCTCTCCGGCCAGTTGCCGGATGGGTCGCGCGTACTGGTCACCAGCGGTTCCGACAGAT TGCTGTTCCGCCCGCGCCAGCCGGTCAACGAAGCGGCGTAA Protein sequence : MNIEKYSERVRGFLQSAQTNALSQGNQQFTPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKVSGGDGQ VYLSQPLAKVFTTAEEASKKAGDSFVTVERLLQALAIESSASTSATLKKAGVTPAGLNQVINDIRKGRTADSANAEQGFD SLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA LDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDPALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA RLRMQVDSKPEELDELDRRIIQLKIEREALKKETDQASADRLKRLETELTSLEEEADALTARWQAEKQKLGLAADLKKKL DEARNELAIAQRKGEFQRAGELAYGVIPNLEKDLQTAEEQDGGRDSMVQEVVTADNIAHIVSRWTGIPVDKMLEGERDKL LRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDDTAMVRMDMSEYME KHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN LGAEYLTQLKEGDDSEQVREQVMDVVRAHFRPEFLNRVDEIILFHRLKREEMGAIVDIQLERLLQLLSERKIALELDEDA RNWLANRGYDPVYGARPLKRVIQKYVQDPLAEQILSGQLPDGSRVLVTSGSDRLLFRPRQPVNEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-101 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002545837.1 | ATP-dependent Clp protease | VFG2076 | Protein | 4e-114 | 43 |
| clpB | YP_002545837.1 | ATP-dependent Clp protease | VFG2084 | Protein | 1e-103 | 43 |
