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Name : clpB (Avi_3951) Accession : YP_002550865.1 Strain : Genome accession: NC_011989 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3325783 - 3328389 bp Length : 2607 bp Strand : - Note : - DNA sequence : ATGAACGTAGAAAAATATTCCGAACGGGTGCGCGGCTTTTTGCAGTCTGCCCAGACGCATGCGCTGTCGGAAGGCCACCA GCAATTTACCCCTGAACATGTGTTGAAAGTGCTTCTGGATGATGAGCAGGGCATGGCCTCCTCGCTGATCAGCCGCGCGG GCGGCGACCCAAAGGAAGTCAGGATCGCCAATGATGCAGCGCTTGCCAAGCTGCCGAAAGTGTCGGGCGGCAATGGTCAG GTCTATCTTGCCCAGCCCCTGGCCCGGGTGTTTTCCACCGCGGAAGACGCGGCCAAGAAGGCGGGCGACAGTTTCGTTAC CGTCGAGCGGCTGCTGTTGGCCCTGGCGGTCGAAACCTCGGCATCCACATCCGCCAGCCTGAAAAAGGGCGGGGTTACGG CTGCGGCGTTGAACCAAGTGATCAATGATGTCCGCAAGGGGCGCACCGCCGACACCGCCAATGCCGAACAGGGCTTCGAT GCCTTGAAGAAATATGCCCGTGACTTGACGGCAGAGGCGCGAGAAGGCCGGCTCGATCCGGTGATTGGCCGCGACGATGA AATTCGCCGCACGATGCAAGTCCTGTCACGCCGCACCAAGAACAATCCCGTCCTGATTGGTGAGCCCGGCGTCGGCAAGA CGGCGATTGCCGAAGGCCTGGCTATTCGTATCGTCAATGGCGATGTGCCGGAGAGTCTGAAAGACAAGAAATTGATGGCG CTGGATATGGGCTCGCTGATTGCCGGCGCCAAATATCGCGGCGAATTCGAGGAACGCTTGAAGGCCGTGTTGAACGAAGT TCAGGCCGATAACGGCGAGATCATCCTGTTTATCGACGAAATGCACACGCTGGTCGGCGCGGGCAAGAGCGATGGCGCTA TGGATGCGTCCAACTTGCTGAAACCCGCACTGGCGCGTGGCGAATTGCATTGCGTTGGGGCAACGACGCTGGACGAATAT CGCAAGCATGTGGAAAAAGACCCGGCGCTTGCACGGCGTTTCCAGCCTGTGATGGTGGATGAGCCGACGGTGGAGGATAC GATTTCCATCCTGCGCGGCCTCAAGGAAAAATATGAGCAGCATCACAAGGTTCGGATTGCCGATTCGGCCATCGTCGCAG CTGCGACCTTGTCGAATCGTTACATCACCGACCGCTTCCTGCCGGACAAAGCCATCGACTTGATGGACGAAGCTGCCTCG CGTCTTCGCATGCAGGTGGATTCCAAGCCGGAAGAGCTGGATGAATTGGACCGCCGTATCATTCAGTTGAAGATCGAGCG GGAAGCCCTGAAGAAGGAAACCGACATCGCGTCCGCCGACCGGTTGAAGCGGCTGGAAAGCGAATTGGCCTCGCTGGAAG AAGAAGCCGATGCGCTGACGGCCCGCTGGCAGTCGGAAAAACAGAAGCTGGGTCTTGCCGCCGATCTCAAGCGTCAGCTT GATGAGGCTCGCAACGACTTGGCCATCGCCCAGCGCAAGGGCGAATTCCAGCGTGCCGGCGAACTGGCCTATGGTGTTAT TCCAGGCCTCGAAAAGCAGTTGACCGATGCCGAGGCAAAGGATGCCTCTGGCGCGGCCAGCATGGTGCAGGAAGTGGTAA CACCCGACAATATCGCTCATATCGTCTCGCGTTGGACCGGCATCCCGGTGGACCGGATGTTGCAGGGCGAACGGGAAAAG CTGCTGAGAATGGAGGACGAACTGGCAAAATCGGTGGTCGGGCAGGGCGATGCGGTGCAGGCCGTATCGCGGGCCGTGCG CCGTTCGCGGGCCGGACTTCAGGACCCCAACCGGCCGATTGGCTCCTTCATCTTCCTCGGTCCGACTGGCGTCGGCAAAA CAGAGTTGACCAAGTCCCTGGCTCGGTTCCTGTTCGATGATGAAACGGCCATGGTTCGCCTCGACATGTCGGAATATATG GAGAAACACTCCGTATCCCGGCTGATTGGCGCGCCTCCGGGCTATGTCGGCTATGAGGAAGGCGGCGCTCTGACGGAATC GGTGCGGCGCAAGCCCTATCAGGTCGTGCTGTTCGATGAGATCGAAAAGGCGCATCCCGATGTCTTCAACGTGCTCTTGC AGGTTCTGGATGACGGTCGCCTGACGGATGGCCAAGGCCGCACGGTGGATTTCAAGAACACGATCATCATCATGACGTCC AATCTCGGGGCCGAATATCTGACAGCCCTTGGTGAGAACGAGGATGTCGACAGTGTTCGCGACCAGGTGATGAGCGTTGT CCGGGCCTCTTTCCGTCCCGAATTCCTCAACCGTGTCGATGAGATCATCCTGTTCCATCGCCTGCGGCGCAGTGAAATGG GTGCGATTGTCGAGATCCAGATGCAGCGGCTCTTGGCTCTGTTGGCAGAACGCAAGATCACGGTCGATCTTGGCGGGGAT GCCCGCGATTGGATGGCCAATAAGGGCTATGACCCGGTTTATGGTGCAAGGCCATTGAAACGGGTGATCCAGAAATACTT GCAGGACCCGCTCGCCGAGCAGATCCTGTCAGGCGAAGTGCTTGACGGTAGCGAGGTGAAAATCACCGCCGGTTCGGACC GGTTGCTGATCAAGCCGGTCAAGCCGATGGATCAGGTCGCAGCCTGA Protein sequence : MNVEKYSERVRGFLQSAQTHALSEGHQQFTPEHVLKVLLDDEQGMASSLISRAGGDPKEVRIANDAALAKLPKVSGGNGQ VYLAQPLARVFSTAEDAAKKAGDSFVTVERLLLALAVETSASTSASLKKGGVTAAALNQVINDVRKGRTADTANAEQGFD ALKKYARDLTAEAREGRLDPVIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLAIRIVNGDVPESLKDKKLMA LDMGSLIAGAKYRGEFEERLKAVLNEVQADNGEIILFIDEMHTLVGAGKSDGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDPALARRFQPVMVDEPTVEDTISILRGLKEKYEQHHKVRIADSAIVAAATLSNRYITDRFLPDKAIDLMDEAAS RLRMQVDSKPEELDELDRRIIQLKIEREALKKETDIASADRLKRLESELASLEEEADALTARWQSEKQKLGLAADLKRQL DEARNDLAIAQRKGEFQRAGELAYGVIPGLEKQLTDAEAKDASGAASMVQEVVTPDNIAHIVSRWTGIPVDRMLQGEREK LLRMEDELAKSVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYM EKHSVSRLIGAPPGYVGYEEGGALTESVRRKPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTS NLGAEYLTALGENEDVDSVRDQVMSVVRASFRPEFLNRVDEIILFHRLRRSEMGAIVEIQMQRLLALLAERKITVDLGGD ARDWMANKGYDPVYGARPLKRVIQKYLQDPLAEQILSGEVLDGSEVKITAGSDRLLIKPVKPMDQVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-107 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002550865.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 6e-107 | 43 |
| clpB | YP_002550865.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2076 | Protein | 2e-118 | 42 |
