Gene Information

Name : yecC (LF82_2939)
Accession : YP_002556792.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1958718 - 1959470 bp
Length : 753 bp
Strand : -
Note : 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence : 
ATGAGTGCCATTGAAGTTAAGAACCTGGTGAAAAAATTCCACGGTCAGACGGTGCTGCATGGTATCGACCTTGAGGTGAA
GCCTGGCGAAGTAGTGGCAATTATCGGTCCGAGTGGTTCCGGCAAAACCACGTTGCTACGCAGCATAAATCTGCTGGAAC
AACCGGAAGCGGGAACCATCACCGTTGGCGATATCACTATTGATACTGCACGTTCATTAAGTCAGCAAAAATCGCTGATT
CGCCAGTTGCGTCAGCACGTCGGGTTTGTCTTCCAGAACTTTAATCTGTTTCCGCATCGTACGGTGCTGGAAAACATTAT
TGAAGGGCCGGTGATCGTCAAAGGCGAACCGAAAGAAGAGGCCACGGCGCGCGCTCGCGAGCTGCTGGCGAAAGTTGGGC
TGGCCGGTAAAGAAACCAGTTATCCACGTCGTTTGTCTGGCGGTCAACAGCAGCGCGTTGCGATTGCGCGTGCTCTGGCA
ATGCGTCCTGAAGTGATTTTGTTTGATGAGCCAACGTCTGCGCTGGATCCAGAGCTGGTGGGCGAAGTCCTGAACACCAT
TCGTCAGCTGGCGCAGGAAAAGCGCACGATGGTGATTGTGACGCACGAAATGAGCTTTGCCCGGGATGTTGCGGACCGGG
CGATTTTTATGGACCAGGGGCGGATAGTTGAGCAGGGGGTAGCAAAAGCGTTATTTGCTGATCCTCAGCAGCCTCGCACC
CGCCAGTTCCTGGAGAAGTTTCTGCTGCAATAA

Protein sequence : 
MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLI
RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGVAKALFADPQQPRT
RQFLEKFLLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yecC YP_002556792.1 amino-acid ABC transporter ATP-binding NC_012469.1.7686878. Protein 2e-24 41