Gene Information

Name : LF82_778 (LF82_778)
Accession : YP_006118327.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2086809 - 2087093 bp
Length : 285 bp
Strand : +
Note : E24377A; E2348; UMN026; corresponding to LF82_ESCLF2029 in publication : Miquel et al., PLoS One

DNA sequence : 
ATGCAACAAGAAGCGTTAGGAATGGTAGAAACCAAAGGCTTAACTGCCGCCATAGAGGCCGCAGACGCCATGGTGAAGTC
GGCAAATGTTTTGCTGGTCGGCTACGAAAAAATAGGTTCCGGGCTGGTGACCGTCATCGTTCGTGGTGATGTCGGGGCGG
TAAAAGCGGCAACAGACGCGGGTGCCGCAGCTGCGCGTAACGTCGGCGAAGTAAAAGCCGTACACGTTATTCCCCGCCCA
CATACCGATGTCGAAAAAATCTTACCAAAGGGAATTAACCCATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRP
HTDVEKILPKGINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LF82_778 YP_006118327.1 hypothetical protein VFG1596 Protein 2e-13 68
LF82_778 YP_006118327.1 hypothetical protein VFG1598 Protein 1e-12 65
LF82_778 YP_006118327.1 hypothetical protein VFG1597 Protein 2e-12 63