Gene Information

Name : LF82_337 (LF82_337)
Accession : YP_002556901.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : propanediol utilization protein: polyhedral bodies
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2092998 - 2093273 bp
Length : 276 bp
Strand : +
Note : corresponding to LF82_p337 in publication : Miquel et al., PLoS One; E24377A; E2348; UMN026

DNA sequence :
ATGAACAACGCACTAGGACTGGTTGAAACAAAAGGGTTAGTTGGCGCAATTGAAGCTGCAGATGCCATGGTTAAATCCGC
CAACGTGCAGCTGGTTGGCTATGAAAAGATTGGTTCGGGTCTGATTACGGTGATGGTCCGTGGCGATGTTGGCGCAGTAA
AAGCCGCCGTTGATGCAGGAAGCGCCGCCGCAAGCGCCGTTGGCGAAGTGAAATCCTGCCATGTCATCCCGCGCCCACAC
AGTGATGTTGAGGCTATTTTACCTAAATCAGCATAA

Protein sequence :
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASAVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-14 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LF82_337 YP_002556901.1 propanediol utilization protein: polyhedral bodies VFG1596 Protein 4e-15 67
LF82_337 YP_002556901.1 propanediol utilization protein: polyhedral bodies VFG1598 Protein 1e-14 66
LF82_337 YP_002556901.1 propanediol utilization protein: polyhedral bodies VFG1597 Protein 2e-14 64