Gene Information

Name : LF82_339 (LF82_339)
Accession : YP_002556903.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2093722 - 2094354 bp
Length : 633 bp
Strand : +
Note : corresponding to LF82_p339 in publication : Miquel et al., PLoS One; E24377A; E2348; UMN026

DNA sequence :

GTGGATAAACAAACCTTGCAGGAAACAGTGAGCCAGATTCTGGATGAGATGCGCGAGCGCCCTATCCCTCTGGGTGTTTC
CAGTCGTCATATTCATCTTTCAACAGCGGATTATTTGCGTCTTTTTCCTGAACAACCGATTAGCGAGAAAAAGCTGTTAA
TGCAACCTGGCCAATTCGCTGCTGAACAGGTTGTTACGCTGGAGGGACCAAAAGGTAAATTGCACAACGTTCGCTTGTTG
GGGCCGCTACGCAATGCAAGCCAGGTGGAAATTTCCCGTACGGACGCCAGAACGTTAGGGATCACCGCCCCGCTACGCAT
GTCAGGCGATCTCAGCGGCACTCCAGGGATTCGTTTGATAAGCCCATTTGCGGAACTGGAGATCACATCTGGCGTCATTG
TCGCACAACGGCATATTCATATGTCTCCGCTGGATGCCCTGATTTATGGCGTTACGCATGGCGATAAAGTGGCGGTTGCC
ATTAAAGGTGATGAGCGACGACTGATATTCGAAAACGTCGCTGTTCGCGTCTCTCCGGATATGCGTCTTGAAATGCATAT
TGATACCGATGAAGCCAACGCCGCAGGGGCTGATAGCCCTGACGTTTTTGCCACACTGGTGTCAGTGCCATGA

Protein sequence :

MDKQTLQETVSQILDEMRERPIPLGVSSRHIHLSTADYLRLFPEQPISEKKLLMQPGQFAAEQVVTLEGPKGKLHNVRLL
GPLRNASQVEISRTDARTLGITAPLRMSGDLSGTPGIRLISPFAELEITSGVIVAQRHIHMSPLDALIYGVTHGDKVAVA
IKGDERRLIFENVAVRVSPDMRLEMHIDTDEANAAGADSPDVFATLVSVP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	6e-36	53

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LF82_339	YP_002556903.1	propanediol utilization protein	VFG1589	Protein	3e-36	53