Gene Information

Name : LF82_344 (LF82_344)
Accession : YP_002556908.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : propanediol utilization protein: propanol dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2097533 - 2098645 bp
Length : 1113 bp
Strand : +
Note : corresponding to LF82_p344 in publication : Miquel et al., PLoS One; E24377A; E2348; UMN026

DNA sequence : 
ATGAAAACTTTTTCACTGCAGACGCGTTTATACAGCGGAACGGGAAGTCTCAACATACTGAGCCGTTTCACGAATAGGCA
CATCTGGATTATTTGCGACGTCTTTCTGGCACACTCACCACTCGTTGACACGTTGCATCAGGCGCTGCCCGACAGTAATC
GTCTCAGTATTTTTAGCGAAATAACGCCCGACCCAACTATCCAGACCGTGGTGAAAGGCATTGCGCAAATGCAGACTTTA
CGCCCGGATGTGGTTATCGGTTTTGGCGGCGGTTCTGCCCTGGACGCCGCAAAAGCGATTGTCTGGTTCGGTCGCCAGTG
TGGCATTGAAATTGAAACCTGCGTAGCCATTCCTACCACCAGCGGTACCGGTTCCGAAGTGACCAGTGCTTGTGTCATCA
GCGATCCTGAGAAAGGGATTAAATATCCCCTTTTCGATAATGCACTTTATCCGGATATCGCGATCCTTGATCCATCTTTG
GTCGTCAGCGTGCCACCAGCGATAACGGCCAATACCGGGATGGATGTTTTAACCCATGCGCTTGAAGCTTATGTTTCTCC
CCGCGCCAGCGACTTCACGGATGCACTGGTCGAAAAAGCCGTGCAAATTGTTTTTCAATACCTGCCCACTGCAGTGAAGA
AAGGCGATTGTCTTGCCACCCGTGGCAAAATGCATAATGCATCGACGCTTGCAGGAATAGCCTTTAGCCAGGCCGGACTC
GGTTTAAACCATGCACTTGCTCATCAACTCGGCGGACAGTTTCATCTGCCGCACGGCCTGGCGAATGCGCTCCTGCTCAC
GGCGGTAATCCGCTTTAATGCTGGCGATCCGCGCGCAGCCAAACGCTACGCCCGGCTGGCGAAAACGTGCCATTTATGCC
CGGACAACGCCAATGACACCGCCAGCCTGAATGCACTTATTCAACATATTGAACAGCTTAAAACAACCTGTACGCTGCCA
ACACTTGCCAATGCGCTGAAAGAAAAAAAAGCAGAATGGTCAATACGCATACCAGATATGGTTCAGGCAGCGCTGGCGGA
TGCAACGTTGCGTACCAACCCGCGTGCGGCTGATGCCTCCGCGATTGCAGAACTGCTCGAGGAGTTGTTATGA

Protein sequence : 
MKTFSLQTRLYSGTGSLNILSRFTNRHIWIICDVFLAHSPLVDTLHQALPDSNRLSIFSEITPDPTIQTVVKGIAQMQTL
RPDVVIGFGGGSALDAAKAIVWFGRQCGIEIETCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFDNALYPDIAILDPSL
VVSVPPAITANTGMDVLTHALEAYVSPRASDFTDALVEKAVQIVFQYLPTAVKKGDCLATRGKMHNASTLAGIAFSQAGL
GLNHALAHQLGGQFHLPHGLANALLLTAVIRFNAGDPRAAKRYARLAKTCHLCPDNANDTASLNALIQHIEQLKTTCTLP
TLANALKEKKAEWSIRIPDMVQAALADATLRTNPRAADASAIAELLEELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 1e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LF82_344 YP_002556908.1 propanediol utilization protein: propanol dehydrogenase VFG1593 Protein 6e-56 46