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Name : LF82_042 (LF82_042) Accession : YP_002555227.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 300510 - 301034 bp Length : 525 bp Strand : - Note : corresponding to LF82_p042 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; S88; UTI89 DNA sequence : ATGAGTTTTCTTTTGCCGTGTGGTGGAATTATGAATAATATAGATTTATTAAAAACTATAACAAACTACAAAAAAATCAA AAATCCGGCATACCCGGCTCAGGAGAGTCTGTTAATACACTTATATATTAGAGTAAATGACAAAATCCAGAGTATTATAG AAAATGAATTGAGCGAGTATAGAATAAACACTTCAACATTTATGGTGTTAGTTTCATTATATATGTCTGATGATTATTGT CAGTCCCCTTCTGATATTTACAAGGAGTTACAATTCTCCAAAACAAACATCACACACATCATAGACAAATTAGAAAAAAA GAATATTGCCAAAAGAATTAATAATAAAAACGATCGTCGAAGCAAAAGTATTTGCTTAACCCCTGACGGAGTTACACTTG CTCAAAAACTAATAAACACTCAAAATGTAATGCTAAAGAAAATCTGGAGCGGGCTATCAGATGATGAAATGAAAACATTT GAACTCGCCAACAAAAAATTATTATCAAACCTTAATGTTAATTGA Protein sequence : MSFLLPCGGIMNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVLVSLYMSDDYC QSPSDIYKELQFSKTNITHIIDKLEKKNIAKRINNKNDRRSKSICLTPDGVTLAQKLINTQNVMLKKIWSGLSDDEMKTF ELANKKLLSNLNVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66213.1 | putative MarR-family transcriptional regulator | Not tested | PAI III 536 | Protein | 2e-68 | 100 |
| APECO1_1713 | YP_851471.1 | hypothetical protein | Not tested | PAI III APEC-O1 | Protein | 3e-68 | 100 |
| fotX | AAT48705.1 | FotX protein | Not tested | PAI II 4787 | Protein | 1e-26 | 47 |
| fooX | AAT48696.1 | putative regulatory protein | Not tested | PAI I 4787 | Protein | 6e-27 | 47 |
| prfX | CAD42022.1 | PrfX protein | Virulence | PAI II 536 | Protein | 4e-26 | 47 |
| prsX | CAD33722.1 | PrsX protein | Not tested | PAI I 536 | Protein | 4e-26 | 47 |
| sfaX | CAC43423.1 | SfaX protein | Virulence | PAI III 536 | Protein | 2e-26 | 47 |
| papX | NP_755457.1 | PapX protein | Virulence | PAI I CFT073 | Protein | 7e-25 | 46 |
| ECUMN_3330 | YP_002414008.1 | putative HTH-type transcriptional regulator | Not tested | Not named | Protein | 7e-25 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_042 | YP_002555227.1 | hypothetical protein | VFG1688 | Protein | 9e-69 | 100 |
| LF82_042 | YP_002555227.1 | hypothetical protein | VFG1463 | Protein | 2e-26 | 47 |
| LF82_042 | YP_002555227.1 | hypothetical protein | VFG1541 | Protein | 2e-26 | 47 |
| LF82_042 | YP_002555227.1 | hypothetical protein | VFG1649 | Protein | 8e-27 | 47 |
| LF82_042 | YP_002555227.1 | hypothetical protein | VFG1713 | Protein | 2e-25 | 46 |
