|
Name : secF (Cla_1047) Accession : YP_002575620.1 Strain : Campylobacter lari RM2100 Genome accession: NC_012039 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1002412 - 1003383 bp Length : 972 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGCAATTTTTTAGTCAAAAACATGTTTATGATTTTATGAAAATGAGATTTGCAGCCATCTCTTTGTCTTTTATTTTATT TTTTGGTTCTATTTTTATCCTTTTTACTAAGGGTTTGAATTTTGGTATTGATTTTACCGGTGGAACTTTGGTACAACTTC AATACGAGCAAAAAGCTCCTTTGGCTGAAATTCGTAAAGCTTTAGCTATTAATGAAAATTTAAAAGGCGCTAGTGTTACT GAATTTGGTAGTGCTAATGAAGTGATTATTCGTTTTTCAGGAAGTAGTGATAGTTTGGGAAGTGATATTGGGGTAAGCAT TGCAAATTTATTGCAAAGTACTGGTAAATTTGAAGTGCGTCGCGTGGATGTAGTAGGTCCAAAAGTGGGTGATGAATTAA GAAATAAAGGCTTGATGGCTGTTGGAATTTCTTTGATTGCTATTTTGATTTATTTGGCAGTAAGATTTGAATGGCGTTTT GCTATGGCTTCTATCGTGTGTGAAATTCATGATATAGTTATTACTTTAGGTGCTATTGCGTTATTTGAAATAGATGTAAA TTTAGATATTTTGGCGGCTGTTTTAACTGTGCTTGGATATTCTTTAAATGACACGATTATTATTTTTGATAGGATTAGAG AAGGTGTTAAAACAAGTAAAAATTCAAAACTTGATCTAATTATTAATGAATCAGTTTCAGCTACCTTATCAAGAACTACT TTAACAACGGGTTTAACTTTGATTAGTGTTGTGGTGCTTTATTTCTTTGGTGGATCTATGATAGAAGGTTTTGCTCTAAC TATGATAGTGGGTATTGTAGCAGGTACTGCAAGTTCTATATTTGTAGCAAGTCCAGCACTTTTATGGTTTAAATTTAGTG TTGCGCAGTATCGCCAAAAAGAATTAGAAAAAGCAAAGAAAAAACAAGAAAAAGAAAAATTAAGAGCAATGTATGAAAAA GGAACGGTGTAA Protein sequence : MQFFSQKHVYDFMKMRFAAISLSFILFFGSIFILFTKGLNFGIDFTGGTLVQLQYEQKAPLAEIRKALAINENLKGASVT EFGSANEVIIRFSGSSDSLGSDIGVSIANLLQSTGKFEVRRVDVVGPKVGDELRNKGLMAVGISLIAILIYLAVRFEWRF AMASIVCEIHDIVITLGAIALFEIDVNLDILAAVLTVLGYSLNDTIIIFDRIREGVKTSKNSKLDLIINESVSATLSRTT LTTGLTLISVVVLYFFGGSMIEGFALTMIVGIVAGTASSIFVASPALLWFKFSVAQYRQKELEKAKKKQEKEKLRAMYEK GTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 2e-42 | 42 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 1e-42 | 42 |
