|
Name : tgt (Cla_0584) Accession : YP_002575169.1 Strain : Campylobacter lari RM2100 Genome accession: NC_012039 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 558012 - 559133 bp Length : 1122 bp Strand : + Note : Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : ATGGAATTTAAAGTTGAGTATAAAAGCGCAAATGCTAGAGCTTGTCGCATTAAAACTACTCATAGTGAAATTTTAACTCC TGCTTTTATGCCAGTTGGAACTTTAGCTGCAATTAAAAGTTTAGATGCTATTGATATGAGTGAAATTTTAGATGCAAAAA TAATTTTAGCAAATACTTATCATTTGTATTTAAGGCCTAGTTCAAAAGTTATAAAACAAATGGGTGGCTTACATGGATTT AGTAAATTTGATAGATCTTTTTTAACAGATAGTGGAGGTTTTCAAGCTTTTTCTTTAAATAAAATTTCAAAGCCAGATGA AGAGGGGATTAAATTTAAAAGCCATATTGATGGGAGTTTGCATTATTTTACCCCAAAAAGTGTTTTAGATGCACAATATG ATTTTAATTCAGATATTATGATGATTTTAGATGATTTAGTTGCCCTGCCAGCTTCTAAAGAGCGCATAGAACTTTCTTTA AAACGCACTATAAAATGGGCAAAAGAGGCTATTGATTATCATAAACTAAAACAAAATCAAGGTGTTGGAATGGGACAAAA TATTTTTGGTATTATCCAAGGCGGGACTGATTTTGAAGCTAGAAGAATTTGTTCTCAAGCACTTTGTGAGATGGATTTTG ATGGTTTGGCTATAGGTGGATTGAGCGTAGGGGAAGAAAATGAAGTTATGTATGATACGGTTGAAGCTATGATGCCTTAT GTTGATAATAATCGCCCTAGATATTTAATGGGGGTTGGTACGCCTGAGGATTTAGTGGAAAATGTTGCAAGAGGTGTTGA TATGTTTGATTGTGTTATGCCAACTAGAAATGCAAGAAATGGAACTTTATTTACTAGTTTTGGTAAATTTAATATTAAAA AAGCAGAATTTATAACAGATCATAGTCCTATTGATTCAAAATGTTCTTGCTATACTTGTAAAAATTTTTCAAGAGCCTAT TTAAATCATTTATTTAAAGCCAAAGAACTAACTTTTTTTAGACTTGCAAGTTTGCATAATTTACATTATTATTTAAATTT AGCAAAACAAATGCGTGAAGCCATTATCAAAAATGAGTTTGAAAATTTTAAAAAAGAATTTTATAGACAAAGAACATGCT AA Protein sequence : MEFKVEYKSANARACRIKTTHSEILTPAFMPVGTLAAIKSLDAIDMSEILDAKIILANTYHLYLRPSSKVIKQMGGLHGF SKFDRSFLTDSGGFQAFSLNKISKPDEEGIKFKSHIDGSLHYFTPKSVLDAQYDFNSDIMMILDDLVALPASKERIELSL KRTIKWAKEAIDYHKLKQNQGVGMGQNIFGIIQGGTDFEARRICSQALCEMDFDGLAIGGLSVGEENEVMYDTVEAMMPY VDNNRPRYLMGVGTPEDLVENVARGVDMFDCVMPTRNARNGTLFTSFGKFNIKKAEFITDHSPIDSKCSCYTCKNFSRAY LNHLFKAKELTFFRLASLHNLHYYLNLAKQMREAIIKNEFENFKKEFYRQRTC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 2e-72 | 45 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 2e-72 | 45 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 2e-72 | 45 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 2e-72 | 45 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 2e-72 | 45 |
