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Name : secF (NAMH_1481) Accession : YP_002607873.1 Strain : Nautilia profundicola AmH Genome accession: NC_012115 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1385529 - 1386500 bp Length : 972 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGGAACTCTTTAGAGATGAAAAAATATATGATTTTATGAGTAAAAGGAACATCTTTGTTTCTATTTCTTTAATACTTAT TATTTTAAGCCTTTTTTCAATATTTACAAAAGGCTTCAACTGGGGAATTGATTTCCAGGGCGGTGTTGAAGTTCAGGTTA GATTTGAGAAAAAAGCCGATATCGGTGAAATAAGAAAATTGATTTCTCAAAAATTTAAGGGTGCAAATATTACGACATTC GGAAATGAAAACGAAGTTTTAATAAGACTTAACGTCAAAAATGCTTCGACTAACGTTCAGAACGACATAGGACATCAAAT TGCCGAAATTTTAAAACCTCTTGGTAAAATTGACATAAGAAGAGTTGATATTGTAGGTGCAAAAGTCGGAAACGAGCTGA AAGAAAAAGGTCTTCAGGCGTTTATATTCTCAATTATAGGTATTTTAATTTACGTGGCTTTCAGGTTTGAGTGGCGCTTT GCAGTCGCTTCTGTTTTGGCTCTTTTTCATGATACTATAATTTCGTTAGGAGCCGTGAGCTTTTTCCATATAGAAGTAAA TCTGGACGTACTTGCCGCAATCTTGACACTTATGGGATATTCTCTTAATGATACGATAGTCGTATTCGACAGAATTAGAG AACAGGTAAGAGATTCAAAAATCAGGGATCTGGCACTGCTTATTAACGACGCGGTTTCAAGAACTCTAAGCAGAACCGTT CTTACTTCACTGACAACATTCTTTGTTGTTCTCACGCTTTATCTTTTCGGTGGAGAAATAATTAAACCGTTTAGTTTCAC TCTACTCGTAGGTATTATAGTAGGTACATATTCATCAATTTTCATTGCATCCCCACTTCTAATCTGGATGGGATTCAAAA TCGACGATTACAGAAAAAAACTTGCCGAAAAAGAGAAAAAAAGAAAAGAAAAAGAAAAATTAAGAGAAATGTATCAAGGC GGAGTCGTATAA Protein sequence : MELFRDEKIYDFMSKRNIFVSISLILIILSLFSIFTKGFNWGIDFQGGVEVQVRFEKKADIGEIRKLISQKFKGANITTF GNENEVLIRLNVKNASTNVQNDIGHQIAEILKPLGKIDIRRVDIVGAKVGNELKEKGLQAFIFSIIGILIYVAFRFEWRF AVASVLALFHDTIISLGAVSFFHIEVNLDVLAAILTLMGYSLNDTIVVFDRIREQVRDSKIRDLALLINDAVSRTLSRTV LTSLTTFFVVLTLYLFGGEIIKPFSFTLLVGIIVGTYSSIFIASPLLIWMGFKIDDYRKKLAEKEKKRKEKEKLREMYQG GVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 1e-43 | 41 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 8e-44 | 41 |
