Gene Information

Name : rrsC (NAMH_1619)
Accession : -
Strain : Nautilia profundicola AmH
Genome accession: NC_012115
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1521990 - 1523487 bp
Length : 1498 bp
Strand : -
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGAGTGAACGCTGGCGGCATGCTTAACACATGCAAGTCGAGGGGCAGCAGGCGGGAACTTCG
GTTCCCGTGCTGGCGACCGGCGGACGGGTGAGTAACACGTAGCTACTTGCCCCACAGAGGGGGATAACACACCGAAAGGT
GTGCTAATACCGCATACACCCGAGAGGGGAAAGGGCTTCGGTCCGCTGTGGGATAGGGCTGCGGCGTATCAGCTAGTTGG
TGAGGTAACGGCTTACCAAGGCGATGACGCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCC
AGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGGGAAACCCTGACCCAGCAATGCCGCGTGGAGGAAGAA
GCCTTTCGGGGTGTAAACTCCTTTTGCAGGGGAAGAAACTGACGGTACCCTGCGAATAAGCTCCGGCTAACTCCGTGCCA
GCAGCCGCGGTAATACGGGGGGAGCGAGCGTTACTCGGAATCACTGGGCGTAAAGGGTGCGTAGGCGGTTTGATAAGTTG
GGAGTGAAATCCTATGGCTCAACCATAGAACTGCTTCCAAAACTGTCAGACTAGAGTTCGGGAGAGGCCAAGGGAATTCC
TGGTGTAGGGGTGAAATCCGTAGAGATCAGGAGGAATGCCGAAAGCGAAGGCGCTTGGCTGGAACGATACTGACGCTGAG
GCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGGGTACTAGTGGTTGGGGGG
ATAGTCCCTCAGTCACGCAGCAAACGCGATAAGTACCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATA
GACGGGGACCCGAACAAGCGGTGGAGCATGTGGTTTAATTCGAAGATACGCGAAGAACCTTACCTGGGCTTGACATCCCT
GGAACCCTGCAGAGATGCGGGGGTGCTACTTCGGTAGAACCAGGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCG
TGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGTCCTTAGTTGGCATCAGTTCGGCTGGCCACTCTAAGGAGA
CTGCCCGGGCAACCGGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGTCCAGGGCGACACACGTGCTACA
ATGGCCGGGACAGAGAGATGCGAAACCGCGAGGTGGAGCAAATCTCTAAACCCGGTCTCAGTTCGGATTGCACTCTGCAA
CTCGAGTGCATGAAGGCGGAATCGCTAGTAATCGCGGATCAGCCATGCCGCGGTGAATACGTTCCCGGGTCTTGTACTCA
CCGCCCGTCACACCATGGGAGTCGGGTTCACCCGAAGTCGGTATCCCTAAGATAGGGGCCGCCTACGGTGGACCCGGCGA
CTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.1
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.1
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA 2e-90 90.1