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Name : rnhA (NAMH_0096) Accession : YP_002606533.1 Strain : Nautilia profundicola AmH Genome accession: NC_012115 Putative virulence/resistance : Unknown Product : RNase H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 77906 - 78448 bp Length : 543 bp Strand : + Note : identified by match to protein family HMM PF00075 DNA sequence : TTGGCATTTTTGCCTCCTTTTGTTAAAATTTTTATGAATTATAACAGAAAAAAAGAAAAAAGACAAATTTTATCTTTTTA CTTAAATACTCAATTGATAAAAAATATTAAAAAGGTAGTTATGAAAAAAATAGAGATATATACCGACGGCAGTTCCTTGG GAAATCCTGGACCGGGAGGATGGTGTTCCGTTTTAAGATATAAAGGTCATGAAAAAACTATAAGTGGGGGAGAAGAACTG ACAACAAATAACAGAATGGAATTAAAAGCCGTAATCGAAGCGTTAAAATTATTAAAAGAGCCTTGTGAAATTGATTTGTA TGCCGATTCGACTTATGTGTTAAAAGGTATAAGCGAATGGTTGGAAAATTGGAAAAAAAAGAATTTTAAAAATGTTAAAA ATGTTGATTTATGGCAGGAGTTTATTGAAATAAGCAAACCTCATATTATTAATGTGAATTGGGTTAAAGGGCATTCGGGA CATAGGGAAAATGAAATTTGTGATAAAATTGCAAAAGAAGAAGCAGCAAAAAGGAAAAAATAA Protein sequence : MAFLPPFVKIFMNYNRKKEKRQILSFYLNTQLIKNIKKVVMKKIEIYTDGSSLGNPGPGGWCSVLRYKGHEKTISGGEEL TTNNRMELKAVIEALKLLKEPCEIDLYADSTYVLKGISEWLENWKKKNFKNVKNVDLWQEFIEISKPHIINVNWVKGHSG HRENEICDKIAKEEAAKRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 6e-19 | 55 |
