Gene Information

Name : 16S_rRNA_B (Sca_16S_rRNA_B)
Accession : -
Strain : Staphylococcus carnosus TM300
Genome accession: NC_012121
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 174420 - 175973 bp
Length : 1554 bp
Strand : +
Note : -

DNA sequence : 
TTTTATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGAACAGATGAGG
AGCTTGCTCCTCTGATGTTAGCGGCGGACGGGTGAGTAACACGTGGGTAACCTACCTATAAGACTGGAATAACTCCGGGA
AACCGGGGCTAATGCCGGATAATATGCAGAACCGCATGGTTCTGCAATGAAAGACGGTTTTGCTGTCACTTATAGATGGA
CCCGCGCCGTATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATACGTAGCCGACCTGAGAGGGTGATTGGCC
ACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGACGG
AGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAGAACAAGTGCGTAGGTAACTATG
CGCACCTTGACGGTACCTAATCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTT
ATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGG
TCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGA
GGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGCAACTGACGCTGATGTGCGAAACGTGGGGATCAAACAGGATTAGAT
ACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGGGGTTTCCGCCCCTTAGTGCTGCAGCTAACGCATTA
AGCACTCCGCCTGGGGAGTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGT
GGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATMCTTTGACCGCTCTAGAGATAGAGTCTTCCCCTTC
GGGGGACAAAGTGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCA
ACCCTTAAGCTTAGTTGCCAGCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGA
CGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAGTACAAAGGGCAGCGAAACCGCGAGG
TCAAGCAAATCCCATAAAGCTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAAT
CGTAGATCAGCATGCTACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCACGAGAGTTCGTAACACCC
GAAGCCGGTGGAGTAACCTTTTAGGAGCTAGCCGTCGAAGGTGGGACGAATGATTGGGGTGAAGTCGTAACAAGGTAGCC
GTATCGGAAGGTGCGGCTGGATCACCTCCTTTCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-155 86.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-155 86.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-192 83.5
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-192 83.5
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-192 83.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-192 83.4