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Name : pipD (SPC_2656) Accession : YP_002638198.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Virulence Product : peptidase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4690 EC number : - Position : 2693149 - 2694630 bp Length : 1482 bp Strand : + Note : - DNA sequence : GTGGGAACCTTTATGAAAAAGTATCTTGCATTCGCCGTTACGCTGCTGGGTATGGGTAAAGTCATCGCCTGTACTACCCT TTTGGTAGGCAATCAGGCTTCGGCTGACGGCTCCTTCATTATCGCGCGCAACGAGGATGGCTCGGCAAATAACGCCAAGC ATAAGGTTATTCATCCCGTCGCGTTTCATCAACAAGGCGAGTATAAAGCACATCGGAACAATTTTAGCTGGCCGCTTCCG GAGACAGCGATGCGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGGC GGGCGTCGGAATGAGCGCAACGGAAACCATTTATAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACGG GAATCACGGAAGACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGAC ATTATTGAACAAAAAGGCGCTGGCGAAGGTTTCGGTGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGGG AAGCGGTCATCAATGGCTGGCAGTACGACTTCCGACAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGCCATT ACGATCCGAATGATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCCG GCCCGCGGCGAATTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATATCACCTATAATTATCCGCGCGTCTG GACGCTACAACATCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTCCTGTTTTTTTAACGCCAA TAACGAAAATTAGCGTGGCAGCAGTAAAAAACGCGTTACGCAATCACTATCAGGGAACGTCGCACGACCCTTATGCCAGT CATAATCCACAAGAACCATGGCGACCCATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAATT ACCGCAGGCTATCGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTATCAGGGAA TGCGTCATTATCAACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCTG CAAACGCTGGTTATGCAGGACTACAATGCGTTTGCGCCAGATGTGCAACACGCTTGGAAAACATTTGAACAGCAAACAGC TAAGCAGCAGTATAAGATGGAACAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCGCAACGCTTACTGCAAA ACTTTGAAGATAAAACGATGCAAAATGCGCAAACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTAC CGCACAGATATGAAATATCACTTTTCAAGTACGCAACCATAA Protein sequence : MGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLP ETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGD IIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPTDSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDP ARGEFDFHQAYSQDNKNDITYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYAS HNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDSTYWTFRTL QTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQNFEDKTMQNAQTLARRLTNNIITTMTY RTDMKYHFSSTQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipD | NP_460067.1 | pathogenicity island-encoded protein D | Virulence | SPI-5 | Protein | 0.0 | 99 |
| pipD | NP_455591.1 | putative secreted peptidase | Virulence | SPI-5 | Protein | 0.0 | 99 |
| pipD | AAC33721.1 | dipeptidase homolog | Virulence | SPI-5 | Protein | 9e-178 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pipD | YP_002638198.1 | peptidase | VFG0594 | Protein | 0.0 | 99 |
