|
Name : SPC_0298 (SPC_0298) Accession : YP_002635927.1 Strain : Salmonella enterica RKS4594 Genome accession: NC_012125 Putative virulence/resistance : Unknown Product : Rhs family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 324141 - 326375 bp Length : 2235 bp Strand : + Note : - DNA sequence : ATGAGTTTTGTATCCACAAATAATAAATCCGGTATGAGAGGGCTGACGACAACCACGCCGCCGATAACCGGAGAAAGTGG CGGTGTCACCGCAGATTCAGTCGCCGGAAGCGTGGCAGATGCGGCGGAAGCCGCTGTGGAACAGGCTGCGGGATCGCTAT TTGGCGCATTGCCGGAGCCATCAGGACTGGTGAAAGCCGCGGTAGCAGCGGCGCAGGCTGCCGCCGCCGCAGGTATGGCG CAGGATGCGGTATCGGCCATCGTCTCTGCTGTTGCAGGCGGGCCGGGGGCGCATAATGTGACGGTCAGCGGCAGCGCCGT ACCGCCGGGCGCATTACTGTTCGCCAGCCTGGACGGCGGCGAAACATTAAGTGAACTGTTCAGCTATGTGGTACAGCTAA AAACGCCCGACACCCTGAATCTGGGCTATGTCTCCCCGGCGGCCAACCTGCCGCTCAAACCGATGGTGGGCAAAGATCTG TGCGTCAACATCGAACTGGATGGTGGCGGTAAACGACAGATCAGCGGGCTGGTCACGGCGGCGCGGGTGGTGGGCCATGA AGGGCGTTCGGTTACCTATGAGCTGCATATGGAGCCGTGGCTAAAACTGCTGACCCATACCAGCGACTACAAAGCATTCC AGAATAAAACCGTGGTGGATATTCTGGATGAGGTTCTGGCGGAATATCCCTACCCGGTGGAAAAGCGGCTGGTGGAAAGC TACCCGGTACGCACCTGGCAGGTGCAGTACGGTGAAACTGATTTTGATTTTCTTCAGCGACTGATGCAGGAGTGGGGCAT CTACTGGTGGTTTGAGCACAGCGAGGACAGCCACACGCTGGTGCTGGCGGATGCCATCAGCGCCCACAAAGCATGTCCGG ACTCGCCGCTGGTCGAGTGGCACCAGGAAGGGCTGAAGCTGGACAAGGCGTTTATCCACACTATCACGGCAAACGAGAGT CTGCGGACTGGCCAGTGGGTGCTGGATGATTTCGATTTTACGAAGCCACGTTCATTGCTGGCAAACACCGTGGCAAACCC GCGTGAAACCGGTCATGCCACCTACGAGCATTATGAGTGGCCGGGAGACTACTTCGACAAGAGTGAAGGCGAGATGCTGA CGCGCATTCGTATGGAAGCGCAGCGCAGCCCCGGCAGTCGGGTGCTGGGGGGAGGGAATATCCGCACACTCATGACCGGT TATACCTTCACGCTGGAAAACTATCCCACCGCCGAAGTCAATCAGGAATACCTGCTGATGCAGACCTTGCTGTTTGTACA GGACAACGCGCAGCACAGCGGGCAGGACCAGCACTTTACCTTTTCCACCCGTTTTGAACTGCACCCCACCCGCGAGGTGT TCCGCCCGCAGCGGACGGTGAGCAAACCTCACACCAAAGGGCCGCAGAGCGCCATCGTCACCGGCCCGGCGGGCCAGGAA ATCTGGACGGATCAGTACGGGCGGGTAAAGGTACAGTTTGGCTGGGATCGCTACGGCAAAATGGATGAAAACAGCTCCTG CTGGATACGCGTCAGCTACCCATGGGCGGGCAAAGGCTTCGGGATGATCCAGATCCCGCGTATCGGCCAGGAAGTGCTGG TGGATTTCAAAAACGGCGATCCGGATCTGCCGATCATCGTGGGGCGTACCTACAACCAGGACACCATGCCGCCGTGGGGA CTGCCGGGCGCGGCAACACAGAGCGGGATATACAGCCACACTATCGGCGGCGGACCGACCAATGCCAACGCTCTGCGTTT TGAAGATAAACCCGGTAGTGAAGAGGTCTGGCTACATGCTGAAAAAGATCAGCGTATTGAAGTTAATAATAATGAAAGTC ACTGGGTGGGGAATAATCGGGTTAAGGTCATTGATCAGTCAGAAATAGCTACTATTGGCGCTGTCCGCGACCATAAAGTT CAGTATGACGATACCTCTCTGGCCGGAGGAAATAAAACCATTCAGACGGTAAAAGAGTTATATCTGGCAGCGGGTGATTC TATTACCCTGAGTTGTGGTGACACCGTTCTGTACATGAGCAGTAAGGGAGAATTTTACGTAACCTGTAAAACGTTCAATA TTACTGCAACAGATGCCGATGGTCAGATTAATACTATAAAAGGGCAGCTGGATTTAAATATGAATAAAAGAGAACCCAAA GTGGGAACATTTGGTGAGTCAGAAAAAACAGCAATGGCAGCAGTAATTAAGGAAACTTTCCCACCCAAAGAATAG Protein sequence : MSFVSTNNKSGMRGLTTTTPPITGESGGVTADSVAGSVADAAEAAVEQAAGSLFGALPEPSGLVKAAVAAAQAAAAAGMA QDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDL CVNIELDGGGKRQISGLVTAARVVGHEGRSVTYELHMEPWLKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKAFIHTITANES LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTG YTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG LPGAATQSGIYSHTIGGGPTNANALRFEDKPGSEEVWLHAEKDQRIEVNNNESHWVGNNRVKVIDQSEIATIGAVRDHKV QYDDTSLAGGNKTIQTVKELYLAAGDSITLSCGDTVLYMSSKGEFYVTCKTFNITATDADGQINTIKGQLDLNMNKREPK VGTFGESEKTAMAAVIKETFPPKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 90 |
