Gene Information

Name : lolD (SULAZ_0308)
Accession : YP_002728303.1
Strain : Sulfurihydrogenibium azorense Az-Fu1
Genome accession: NC_012438
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 279320 - 279997 bp
Length : 678 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAGTAGTGTTTTACTTGAAAATGTAAAAAAAGTTTACAGAAACGGTCAAGAAGAGGTATGGGCTTTAAAAGGAATAAG
TCTTAAAATTGAAAAAGGTCAGATGGTAGCAGTGATGGGACCTTCTGGGTCAGGTAAAAGTACGCTATTACATATTATAG
GAGGAATAGATTACCCCACAGAAGGAAAAGTAGTTATAAATGGACTACAGATAGACAGTCTAAATGATAAGCAACTTTCA
AAATTTAGAAGTGAAAATATAGGTTTTGTTTTTCAATTCCATTATTTACTTCCTGAGTTTACAGCCTTAGAAAATGTTAT
GATACCTATCCAGATAAAAGGAGAAAAAAATCCAAAAGAAAAAGCTAGTGATATATTAAAAAAATTCAACTTACAACACA
GACTAAACCACAAACCATCTCAGATGTCAGGAGGAGAACAGCAAAGGGTAGCTATAGCAAGGGCTGTAGCAAACGACCCT
TCTCTTCTTATAGCTGATGAGCCTACAGGAAACTTAGACTCTCAAAATGCTAAAAATGTTATAATGTTGTTTAAGCACCT
AAACGAAAGTAAGGGGATGACTATTATCATCGCAACTCATGATATTGAAATTGCAAAATACTGTAAGTATATTTACTATA
TGAGAGATGGTATGTTAGTAGATATTGAAAAAGTTTAA

Protein sequence : 
MSSVLLENVKKVYRNGQEEVWALKGISLKIEKGQMVAVMGPSGSGKSTLLHIIGGIDYPTEGKVVINGLQIDSLNDKQLS
KFRSENIGFVFQFHYLLPEFTALENVMIPIQIKGEKNPKEKASDILKKFNLQHRLNHKPSQMSGGEQQRVAIARAVANDP
SLLIADEPTGNLDSQNAKNVIMLFKHLNESKGMTIIIATHDIEIAKYCKYIYYMRDGMLVDIEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_002728303.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-41 47
lolD YP_002728303.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-37 46
lolD YP_002728303.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-36 45
lolD YP_002728303.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-36 42
lolD YP_002728303.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-36 41