|
Name : iscS (PERMA_1065) Accession : YP_002730851.1 Strain : Persephonella marina EX-H1 Genome accession: NC_012440 Putative virulence/resistance : Unknown Product : cysteine desulfurase IscS Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 4.4.1.- Position : 1021172 - 1022407 bp Length : 1236 bp Strand : + Note : identified by match to protein family HMM PF00266 DNA sequence : ATGTTAAAGAAAAGAGGTTATGTTTATGCAGACCATCTGGCAACAACACCTGTTGCAGATGAAGTTTTAGAGGCAATGCT TCCATACTATAAAGATAAATTTGGAAATCCAACCTCCCTTCATCAGTTTGGTGTGGATGCAAAAAAAGCGATAAACAGAG CAAGGGAGCAGATAGCCCAGCTCTTAAATATAAGCAGACCTGAGGATATAGTTTACACCTCAGGAGCTATAGAGGCTAAT AACCTTGCTATAAAAGGATATGCTAAGGCTCCAGGTATAACAAGAAGAGGTAAGCATATCGTTGTCTCAGCTATAGAACA CCACTCAATCCTCCACTCATGTAAATCACTTGAGAAGGAAGGATTTGAGATAACATATGTCCAGCCTGATCAGTACGGGA TAATTCATCCTGATAAGCTTGCAGAAGCTGTAAGAGAGGATACCATACTTGTTTCTGTAGGTTATGCAAACAGAGAGATA GGAACACTTCAGGATATGCCTGCTCTTGTTAAGGCTGTAAAGGAGAAAAATCCCAGAACTGTTTTCCATTCAGACATAGC TGCTGCTGTAGGTCATACACCTGTTGACCTTGAAGGCTGGGGAGTTGATATGGCATCATTCACAGGTCATTACTTCTATG CTCCTAAAGGTGTAGGAGGACTGTATGTTAAAAAAGGTGTAAGGCTCAAGCCTTTAATTGAAGGTGGAATACAGGAAGGT GGTAGAAGAGCCGGAACAGAACCTGTGCCGGAGATTGTTGGTATGGGAGCAGCTGCTGAACTTGCAATAAAAGAGATGGA TGACAGGGTTAACAGACTTAAAAAGCTGAGAGACAAACTTAAAAAGGGAATAGAAGAGAAGATAGATTATATACAGTTTA CAGGTCATCCTGAGAAAAGACTTCCAAATCATCTTTCACTTATTGTTATGTACATTGAAGGTGAGGCTATGCTCCTAATG CTGAACTACAAAAAGATATACACAGCATCAGGATCAGCATGTGTATCTTTTGCATTAAAACAGTCTCACGTTCTGGCTGC TATAGGTATTGATAAGGAAGCATCTAACGGATCTATAGTTTTCTCACTTGGAAGGGAAAACAGTGAGGAAGACATAGATT ATATAATTGAGGAGTATCCAAAGGTTATACAGAGATTGAGAGAGATATCTCCTTTTGGTCCTGAAAACTGGGATCAGTTT GCCAAAAAGGCTGACAAGTATAAACATGTGAGATAA Protein sequence : MLKKRGYVYADHLATTPVADEVLEAMLPYYKDKFGNPTSLHQFGVDAKKAINRAREQIAQLLNISRPEDIVYTSGAIEAN NLAIKGYAKAPGITRRGKHIVVSAIEHHSILHSCKSLEKEGFEITYVQPDQYGIIHPDKLAEAVREDTILVSVGYANREI GTLQDMPALVKAVKEKNPRTVFHSDIAAAVGHTPVDLEGWGVDMASFTGHYFYAPKGVGGLYVKKGVRLKPLIEGGIQEG GRRAGTEPVPEIVGMGAAAELAIKEMDDRVNRLKKLRDKLKKGIEEKIDYIQFTGHPEKRLPNHLSLIVMYIEGEAMLLM LNYKKIYTASGSACVSFALKQSHVLAAIGIDKEASNGSIVFSLGRENSEEDIDYIIEEYPKVIQRLREISPFGPENWDQF AKKADKYKHVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 1e-43 | 41 |
