Gene Information

Name : PERMA_1738 (PERMA_1738)
Accession : YP_002731502.1
Strain : Persephonella marina EX-H1
Genome accession: NC_012440
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1682033 - 1682707 bp
Length : 675 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAGTAGTATAGCTATAAAAACAGAGAATCTAAAAAAGATATACTTCCTTGAAGGTGCACAGATTGATGCCCTTAAAGG
GATAGATCTTGAGATCTATGAAGGTGAGATGGTTGCACTTATGGGACCTTCAGGTTCAGGTAAATCAACACTTTTACATC
TTATAGGTGGTATAGATATCCCTACTGAGGGAAAGGTCTTCATACACGGAACAGATATATTCTCTTTAAATGAGAAAAGA
CTCGCAAGGTTCAGAAATGAAAACATAGGCTTTGTTTTCCAGTTTCATTATCTTTTGCCTGAGTTTACTGCACTTGAAAA
TGTTATGTTTCCAGTTCAGATTTATAGTAAAGGGGATGCTGAGGAAAAGGCGAGGGAGATTTTAGAGAGGCTCGGTCTTT
CACACAGGATCAACCATAAACCATCCCAGATGTCAGGTGGTGAACAGCAGAGGGTTGCTATAGCAAGGGCGATAGTAAAC
CGCCCCTCAATCATTATAGCTGATGAACCTACAGGTAATCTTGACAGCAGGAATACAGAAACAGTAATGAAAATTTTCAG
GGAAATGAACGATAAAGATAATGTGACCATAATCATTGCAACACACGATAAAGATGTAGCAAATTATTGTAAGAGAACTA
TATATCTGAGAGATGGGATTTTGGTCAATGAATAA

Protein sequence : 
MSSIAIKTENLKKIYFLEGAQIDALKGIDLEIYEGEMVALMGPSGSGKSTLLHLIGGIDIPTEGKVFIHGTDIFSLNEKR
LARFRNENIGFVFQFHYLLPEFTALENVMFPVQIYSKGDAEEKAREILERLGLSHRINHKPSQMSGGEQQRVAIARAIVN
RPSIIIADEPTGNLDSRNTETVMKIFREMNDKDNVTIIIATHDKDVANYCKRTIYLRDGILVNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PERMA_1738 YP_002731502.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 5e-41 47
PERMA_1738 YP_002731502.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 1e-45 47
PERMA_1738 YP_002731502.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686946. Protein 7e-25 43
PERMA_1738 YP_002731502.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 1e-36 42
PERMA_1738 YP_002731502.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 7e-32 41