|
Name : SPJ_0140 (SPJ_0140) Accession : YP_002735252.1 Strain : Streptococcus pneumoniae JJA Genome accession: NC_012466 Putative virulence/resistance : Virulence Product : lactococcin-G-processing and transport ATP-binding protein LagD Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.4.22.- Position : 125209 - 127428 bp Length : 2220 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193 DNA sequence : ATGTTAAAAAAATATCCTTGTACGATGCAACATGACCAGTCAGATTGTGCTGCGGCAGTTGTTTCAACAGTTCTTTTATC TTACAAAAAGGAACTATCAATCATGAAGATTAGGGAAATTATTGGTACAGACATGTATGGAACGACTGTCAGTGGTATTG TTTCAGGTCTGAATAAGTTGAATTTTACAGTAAAAGCTGTTCGAGTAGCACTGGAAGATTTGACTCCAAAATTAACATTT CCTGCGATTCTTCAAGTTAAGAATGATTTAGGTCAAAATCATTTTGTGGTACTACATAGTATCAAAAGGAATAGTAAGTT CTACGTAGCAGACCCTGCTAGTGGCATACGCAAGATGTCAAGTGACGAACTGGGAGAAATTTATCAAGGTATTACTCTTT TTATGGTTCCAAATTCGGATTTTGAAAGAGGGAAACTAAAGGGAAAAGGACTTCTTGATTTATTTGGAAGGTTAATTTTT AATCAAAAAGGATTGATTAGTACAGTCATATTAGCTTCCTTTGTTTTAAGTATCATTGGTATTTTATCGAGTCTCTTTTC AAAAGTTATCATGGACGAGGTGATTCCATATGCTTTAAAAAATAGTCTGTATATGTTTTTGATAGTATTTGGAATAGTGT CGTTCTTACAGACTCTTCTATCTGCATTTCGTCAGCACGTTCTTTTGTTTCTATCTCGAAAAATTGATATACCGGTTTTA ATGGGATATTATGACCATATTATTCATCTTCCTTATAGTTTTTTTGGAAGTCGTAGAGTTGGTGATGTTTTAACAAGATT TCAAGATGCGATGACGATAAAGAATGTGTTTACGTCAGTCTCTATTTCATTAGTCATGGATATCACCTTGTCAGTTATTA GTGCGGTTGTCCTTTGGACTATTAATCAATCTTTATTTCTGATATTAGTTTTTATGGTTATTGTTAACATCATTCTTATA TACTGTTTTAAAAAGCCTTATAAAAAAATTAATCATGAACAAATGGAAGCAAATGGACTTCTTAATTCACAGTTAATTGA ATCTATTCGTAACATTGATACCATTAAGTCTCAGCATGATGAGGAACAACGTTTAAACAAAATTGAAGAAAAATTTGTTC ATACTTTAGAAATTGGTTATAAAGAGGGTGTTTTGCAGAATATTCAATCTACAATATCTTCAATGACCTCAACCATGGGT GGGTTATTATTTATGGGAGTGGGCGCCTTATTTATCATTGATGGAAAAATGACTATTGGGGACCTCTTGGTTTTTCAGAC ATTAAGTCAATATTTTACAGAACCTATTCAGAATTTAGTTGGCTTGCAGTTAACCTTTCAAGAGGTACAGGTTGCGGTTA GTCGGCTTCAAGAATTGATGGAAGTAGATCGTGAAGACATTGCCTTGGATTATAGTATTAGAGACTTCACCTTATGTGAT GACATTGAATTTAAAGATGTAACATTTGCCTATGGTTCACGCCCTCCTGTTATCAAGGACTTTAATTTGCGAATTAAACA AGGAGAAAAAATAGCTTTTGTTGGAGAAAGCGGAGCAGGAAAAAGTACGCTAGTTCGTTTGTTATTAAGATTTATAAATC CGAGTGAGGGGAAAATTCGTATAGGAGAAAATGACTTATCAGATCTTGACTATGGTAAACTACGTAAGAAAATTTCCTAC ATTCCTCAGACCATAGAACTCTTTACAGGGACAATTATTGATAATCTAAAAATTGGTAATCCTTCTGTTACATATGAGGA TATGGTGAGAGTTTGTCGTATTGTTGGTATTCATGATACGATTCAACGTCTTCAAAATCGTTATGGCTCCTTTGTAGAAG AAGGCGGTCAAAATTTCTCGGGTGGAGAGAAACAACGATTGGCTATTGCAAGAGCACTACTGAGTAAAGCTGATTTGTAT ATATTTGATGAGGCAACCTCTAACTTAGATTCATTTAGTGAACAGATTATTCAGGATTTAATCTTTAATAAAATAATGGA TAAGACAACAATTGTAGTAGCCCACAGGCTGTCTACAATTCTTCGATGTGATAAGATATGCTTTTTAGAAAATGGGACTA TTATGGAATATGGTACTCATGAAGAACTAATGGCGAAAAATGGAAAGTATGCTAGAATGGTTGGTTTGCAGAGCGTTCAA GTGAATCAACAAATTCAGTCACAGGCTGTGTTAGATACAGAGGAGGTTACTTATGGCTAA Protein sequence : MLKKYPCTMQHDQSDCAAAVVSTVLLSYKKELSIMKIREIIGTDMYGTTVSGIVSGLNKLNFTVKAVRVALEDLTPKLTF PAILQVKNDLGQNHFVVLHSIKRNSKFYVADPASGIRKMSSDELGEIYQGITLFMVPNSDFERGKLKGKGLLDLFGRLIF NQKGLISTVILASFVLSIIGILSSLFSKVIMDEVIPYALKNSLYMFLIVFGIVSFLQTLLSAFRQHVLLFLSRKIDIPVL MGYYDHIIHLPYSFFGSRRVGDVLTRFQDAMTIKNVFTSVSISLVMDITLSVISAVVLWTINQSLFLILVFMVIVNIILI YCFKKPYKKINHEQMEANGLLNSQLIESIRNIDTIKSQHDEEQRLNKIEEKFVHTLEIGYKEGVLQNIQSTISSMTSTMG GLLFMGVGALFIIDGKMTIGDLLVFQTLSQYFTEPIQNLVGLQLTFQEVQVAVSRLQELMEVDREDIALDYSIRDFTLCD DIEFKDVTFAYGSRPPVIKDFNLRIKQGEKIAFVGESGAGKSTLVRLLLRFINPSEGKIRIGENDLSDLDYGKLRKKISY IPQTIELFTGTIIDNLKIGNPSVTYEDMVRVCRIVGIHDTIQRLQNRYGSFVEEGGQNFSGGEKQRLAIARALLSKADLY IFDEATSNLDSFSEQIIQDLIFNKIMDKTTIVVAHRLSTILRCDKICFLENGTIMEYGTHEELMAKNGKYARMVGLQSVQ VNQQIQSQAVLDTEEVTYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 5e-144 | 47 |
