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Name : clpB (ACP_2407) Accession : YP_002755447.1 Strain : Acidobacterium capsulatum ATCC 51196 Genome accession: NC_012483 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2780845 - 2783469 bp Length : 2625 bp Strand : + Note : identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGGCGATTCGTTGGGACAAATTTACGGTGAAGTCGCAGGAGGCGGTGCAGGCGGCGAGTGGGATTGCGAGCGAGCATGG GAATCCTGAGCTGCTGACGCTGCACTTGCTGGCCGCACTGCTGGCCGATCAGGAGAGCATCGTGGTGCCGGTGCTCGAGA AGGTGGGCGTGCCCACGGCGCAGTTGCGCACCAAGGTGGAGGAAGCGATTGCGAAGCTGCCGAAGGTGAGCGGAGCCTCG GCGCAGCCTGGGATTGCGGCGACGCTGAACAAGGTGTTTGACCAGGCCTTCAAGGAAGCGGAGAACTTCAAGGACGATTA CGTCTCGACGGAACATCTTTTATTGGCGATGGCCGCGCAAAAGAACGATGGCGCGCAGTTGCTGCTGGCCTCGGTGGGCG CGACGTATGACGCGATATTAAAGAGCCTGAGCAGCGTGCGCGGTTCGCAGCGGGTGACGGACCAGAATCCGGAAGGCAAA TTTCAGGCGCTGGAGAAGTATGCGAAGGACCTGACGGAACTGGCGCGGCGCGGCAAGCTGGACCCGGTGATTGGGCGCGA CGAGGAGATTCGCCGCGTGGTGCAGGTGCTGTCGCGGCGGACGAAGAACAATCCGGTGCTGATTGGCGAGCCGGGCGTGG GCAAGACGGCGATTGTGGAGGGGCTGGCGCGGCGCATTGTGCATGGCGACGTGCCGGAGATTTTGCGCGAGAAGCGAGTG ATTTCGCTTGACCTTGGCTCGATGCTGGCCGGGGCGAAGTTTCGCGGCGAGTTTGAAGACCGCCTGAAGGCTGTGCTGAA AGAGATTGAGGAGTCGAATGGGCAGATCATTCTGTTCATCGACGAGCTGCACACGCTGGTGGGCGCGGGCGCGGCAGAGG GCGCGATTGATGCGTCGAACATGCTGAAGCCGGCGCTGGCGCGCGGCGAGCTGCGCGCGATTGGCGCGACGACGCTGAAC GAGTATCGCAAATACATTGAGAAGGACGCGGCGCTGGAGCGGCGCTTTCAGATTGTGTTTGTGGGCGAGCCGAATGTCGA GGACACGATTGCGATTTTGCGCGGGCTGAAGGAGCGCTATGAGGCGCATCACAAGGTGCGCATCAAGGATGCGGCGATTG TGTCGGCCGCGACATTGTCGCATCGCTATATCTCGGACCGGTTTTTGCCGGACAAGGCGATTGACCTGGTGGACGAGGCG GCGGCTTCGCTGGCGATTCAGATAGGATCGGTGCCCACGGAGATAGATCAACTGGAGCGCGAGGCGACGTCGCTTGAGAT TGAGCGGACGGCGTTGAAGCGCGAGACGGACCAGAATTCCAAAGACCGGCTGGAAGTGGTGGAGCGCGAATTGGCCGCAT TGAAGGAGCAGGCGACCGGGCTGCGGGCGCGCTGGCAGAAGGAGCGCGAGGCAATCACGCAACTGAGCGAGCTGAAGAAC CGTGTGGAGGCGCTGCGCTTTGAGGCCGATGAGCAGACGCGGCGCGGAAACCTGGAGCGCGCCGCGCAGATTCAGTACGG CGAGTTGCCGCGGCTGGAGGCCGAGGTGCAGAAGCTGAACGCGCAGCAGGAGGGCGCGGAGAATGCGCAGCGCATGCTGA AAGAAGAAGTGGATGAGGAAGACATTGCGCGCGTGGTGAGCAAGTGGACCGGGATTCCCGTGGCCAAGATGCTTGAGGGC GAAGTGCAGAAGCTGGTGCAGATGGAGGAGCGGCTGCGCGACCGGGTCGTGGGGCAGGATGAGGCGCTGAGCACGGTGGC GAATGCGATCCGTCGTTCGCGCGCGGGGCTGAGCGACCCGAAGCGGCCGATTGGCTCGTTTATTTTCCTGGGACCCACGG GCGTCGGCAAGACGGAGACGGCGCGGGCGCTGGCCGAGTTCCTGTTTGATGACGAGCAGGCGATGATTCGCATCGACATG AGCGAGTACATGGAGAAGCATGCGGTGGCGCGTTTGATTGGCGCGCCTCCGGGCTATGTGGGCTATGACGAGGGCGGCCA GTTGACGGAGGCCGTGCGGCGGCGGCCTTACTCGGTGGTGCTGTTTGACGAGATCGAGAAGGCGCATCCGGATGTGTTCA ACGTGCTGCTGCAGGTGCTGGACGACGGGCGGCTGACGGACTCGAAGGGGCGCACGGTGGACTTCAAGAACACGGTGCTC ATCATGACCTCAAACCTGGGCGCGCAGGCGCTGCATGCCGAGGCGTTGCAGGATGAAGCGGCCTTTGAGCAGGCGCGCGA GCAGGTGATGGAGGTGCTGCGGCAGAGCTTTAGGCCGGAGTTTTTGAACCGCGTGGATGACATTGTGATCTTCCGTCCGC TGGGCGAAGCGCAACTGGTGCATATTGTGGATCTGCGGCTCAAGGATCTGGAGCAGTTGCTGAAGGAGCGTCACATCACG ATTGAGCTGACGGATGCGGCGCGGCATCAGCTCTTCCTGAGTGGATATGATCGCGCGTACGGTGCGCGTCCGTTGAAGCG TGCCATGCAGCGGTTGATTCAAGATCCGCTGGCGATGCGGATTCTGGATGGAGAGGTGCTGCATGGGGATCATGTGCGGA TTGATGCTGATCCGCTCAAGAACCAGTTGAGCTTTGAGGTGACGGGAAGAGAGGCGGTGAAGTGA Protein sequence : MAIRWDKFTVKSQEAVQAASGIASEHGNPELLTLHLLAALLADQESIVVPVLEKVGVPTAQLRTKVEEAIAKLPKVSGAS AQPGIAATLNKVFDQAFKEAENFKDDYVSTEHLLLAMAAQKNDGAQLLLASVGATYDAILKSLSSVRGSQRVTDQNPEGK FQALEKYAKDLTELARRGKLDPVIGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVHGDVPEILREKRV ISLDLGSMLAGAKFRGEFEDRLKAVLKEIEESNGQIILFIDELHTLVGAGAAEGAIDASNMLKPALARGELRAIGATTLN EYRKYIEKDAALERRFQIVFVGEPNVEDTIAILRGLKERYEAHHKVRIKDAAIVSAATLSHRYISDRFLPDKAIDLVDEA AASLAIQIGSVPTEIDQLEREATSLEIERTALKRETDQNSKDRLEVVERELAALKEQATGLRARWQKEREAITQLSELKN RVEALRFEADEQTRRGNLERAAQIQYGELPRLEAEVQKLNAQQEGAENAQRMLKEEVDEEDIARVVSKWTGIPVAKMLEG EVQKLVQMEERLRDRVVGQDEALSTVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLFDDEQAMIRIDM SEYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVL IMTSNLGAQALHAEALQDEAAFEQAREQVMEVLRQSFRPEFLNRVDDIVIFRPLGEAQLVHIVDLRLKDLEQLLKERHIT IELTDAARHQLFLSGYDRAYGARPLKRAMQRLIQDPLAMRILDGEVLHGDHVRIDADPLKNQLSFEVTGREAVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-117 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-115 | 44 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-115 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002755447.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 3e-125 | 46 |
| clpB | YP_002755447.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 1e-118 | 41 |
