Gene Information

Name : Lm4b_01164 (Lm4b_01164)
Accession : YP_002757867.1
Strain : Listeria monocytogenes Clip81459
Genome accession: NC_012488
Putative virulence/resistance : Virulence
Product : carboxysome structural protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1170354 - 1170629 bp
Length : 276 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAATGCACTTGGAATGATTGAAACTAAAGGTCTTGTTGGCGCAATTGAAGCAGCTGACGCAATGGTAAAAGCAGC
AAATGTATCACTAGTAGGGTATGAAAAAATCGGTTCAGGTCTTGTAACTGTTATGGTTCGCGGTGATGTTGGTGCAGTAA
AAGCAGCAACCGATGCAGGCGCAGCAGCAGCTCGTAACGTTGGCGAAGTACAATCTATCCACGTTATCCCACGTCCACAC
AATGATGTAGAAACGTTGCTACCAAAAGGTCTATAA

Protein sequence : 
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lm4b_01164 YP_002757867.1 carboxysome structural protein VFG1596 Protein 1e-14 67
Lm4b_01164 YP_002757867.1 carboxysome structural protein VFG1598 Protein 7e-14 65
Lm4b_01164 YP_002757867.1 carboxysome structural protein VFG1597 Protein 7e-14 65