Gene Information

Name : GAU_0059 (GAU_0059)
Accession : YP_002759571.1
Strain : Gemmatimonas aurantiaca T-27
Genome accession: NC_012489
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 72427 - 73152 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence : 
ATGACGATGACCACATCTCAAACCCTTGGGGCAACGTCTTTGCCGTGCATCGTGCAGCTCGAAGGTATCGGCAAGGTGTT
CGCTACCGACGAGATCGATACTCACGCACTGCAGGATGTATCTCTCGAGGTACAACGTGGAGACTGGGTGAGTATCGAGG
GACCCAGTGGCAGCGGCAAGAGCACCTTGCTCAGCATACTCGGCTTGCTCGACACGCCGAGCAGCGGCCACTACCTGCTG
GCCGGCACACCAGTGAGTGCACTGGGCGTGGACGCCCGCGCCGACGTACGACTCCAGCAGATCGGCTTCATTTTCCAGCA
GTTCAACCTCATCACCGATCTCACGGTGGGTGAAAACGTAGCGTTGCCACTCACCTATCGTGGGATCGCCCCGGCAGAAC
GGGAGGCGCGGGTTGCCGATGCGCTGGAGCGCGTCGGACTGGCGCACCGGGCGAATCACTATCCCTCGCAACTGTCAGGC
GGCCAGCAACAACGTGCCGCGGTGGCACGGGCTGTAGCGGGTGACCCGGTGCTGCTATTGGCCGACGAACCCACGGGCAA
TCTCGACAGCGCCAGTGGGGATGCCGTCATGACATTGCTATCGGAGTTGCACGCCGATGGCGCTACGCTGGTGATGGTCA
CTCACGATGCCCGCTATGCGAGTCGTGCACATCGCACCATTTCACTGTTCGACGGCCGGATCGGCGAGCCCGTTGGCACG
GGTTGA

Protein sequence : 
MTMTTSQTLGATSLPCIVQLEGIGKVFATDEIDTHALQDVSLEVQRGDWVSIEGPSGSGKSTLLSILGLLDTPSSGHYLL
AGTPVSALGVDARADVRLQQIGFIFQQFNLITDLTVGENVALPLTYRGIAPAEREARVADALERVGLAHRANHYPSQLSG
GQQQRAAVARAVAGDPVLLLADEPTGNLDSASGDAVMTLLSELHADGATLVMVTHDARYASRAHRTISLFDGRIGEPVGT
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_0059 YP_002759571.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-44 53
GAU_0059 YP_002759571.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-42 46
GAU_0059 YP_002759571.1 putative ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-26 42
GAU_0059 YP_002759571.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GAU_0059 YP_002759571.1 putative ABC transporter ATP-binding protein VFG0869 Protein 2e-16 42