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Name : RER_39290 (RER_39290) Accession : YP_002767376.1 Strain : Rhodococcus erythropolis PR4 Genome accession: NC_012490 Putative virulence/resistance : Unknown Product : putative MFS transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 4312561 - 4313889 bp Length : 1329 bp Strand : + Note : - DNA sequence : ATGACCTCCATCGCCTCACCGACCGCTACGCGCACCGCCGCGACGGTCAAGGCGCGCAAGGCCGCCCTCGGCAGCTTTGT CGGCACCGCCATCGAGTGGTACGACTTCTTCATCTACGGCACCGCCGCCGCGCTCGTGCTCGGCAAGCAGTTCTTCCCCG GCACGTCCGATCTGGCCGGCACCCTGGCCGCCTTCGCCACCCTCGCCGTCGGATTCGTCGCGCGTCCCATCGGCGGAATC GTGATGGGCCACTTCGGCGACCGCATCGGACGCAAATCCATGTTGGTCACCTCGTTGATGCTGATGGGCTGCGCCACCGT TGCCATCGGCCTGCTACCCAACTACGCCGCCATCGGCGTCTTTGCCCCCATACTCCTGGTGACCTTGCGATTCGTTCAGG GACTCGGTGTCGGCGGCGAGTGGGGCGGCGCAGTTCTGGTCGCCACCGAAAACGCACCGGAGGGCAAGAAGGGGCTGTAC GGCAGCGCACCACAAATCGGTGTTCCCGCAGGCGTATTGGTGGCCAATCTCGTCTATCTCCCCCTCGCCGCCTTCATGGA CGACGATGCATTCAACTCCTGGGGATGGCGAATCCCGTTCCTGCTCAGCGCAGTTCTTGTGGGCGTTGCGATGTGGATCC GTCTCGGCCTCGAGGAAAGTGACGAGTTCACCGCTTCGAAGTCCGAAGCACCGGCGGAGTCCATGCCGATTCTCGAGGTT CTCACCAGACACTGGAAGACAGTGCTCCTCGCCGGTGGAACCTTCATCGCCACCAACGGAATTGCGTACGCGTACATGGT TTACGTGCTCAAATACGGCGAGTCCGAACTCGGCTTCAGCAAAACCACGATGCTCTTCCTCCTCATCGCATCCTGCCCGT TCTGGATGGCGGGAATGGCTTTCAGCGCTCACAAGTCGGACACTCTCGGACGCCGAACCGTCTACATCCGCAGTTCGATC GCCCTGGTAGTGGCGGCAGCGGTGTTCTTTCCGCTGATCGACACGGCGATCGTCCCGGTGATGCTCGTATCGATGATCGC CCTCGGCTTCACGCTCGGCTGCTGCGCCGGCCCACAAGCGGCGCTGTTCGCCGAATTGTTCCCCGCACACATCCGCTACA GCGGAGCGTCACTCGGTTACCAGATCGGCGCAATCCTCGGCGGCGGTCTGGCCCCGATGATCGCCACCGCGCTCTACGCC GCCTTCGACACCTCGTTCGCCATCACCGTTTACTTCGTGATCATTGCCGTGATCAGCTTGGTTTCCATCCTGCTACTCCC GGAACCTCAACTGATCCCGAAAAACACTGCCGCACAGAAAGCCTCGTGA Protein sequence : MTSIASPTATRTAATVKARKAALGSFVGTAIEWYDFFIYGTAAALVLGKQFFPGTSDLAGTLAAFATLAVGFVARPIGGI VMGHFGDRIGRKSMLVTSLMLMGCATVAIGLLPNYAAIGVFAPILLVTLRFVQGLGVGGEWGGAVLVATENAPEGKKGLY GSAPQIGVPAGVLVANLVYLPLAAFMDDDAFNSWGWRIPFLLSAVLVGVAMWIRLGLEESDEFTASKSEAPAESMPILEV LTRHWKTVLLAGGTFIATNGIAYAYMVYVLKYGESELGFSKTTMLFLLIASCPFWMAGMAFSAHKSDTLGRRTVYIRSSI ALVVAAAVFFPLIDTAIVPVMLVSMIALGFTLGCCAGPQAALFAELFPAHIRYSGASLGYQIGAILGGGLAPMIATALYA AFDTSFAITVYFVIIAVISLVSILLLPEPQLIPKNTAAQKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-50 | 41 |
