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Name : shiA (ROP_22000) Accession : YP_002779392.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2355381 - 2356733 bp Length : 1353 bp Strand : - Note : - DNA sequence : ATGAGCGATCACGCCTTCACCCCGGCGGCCGAGAAGCAGGCGCGCAGAGCAGCGCTGAGCAGCTTCGTCGGCGCGGTCAT CGATTGGTACGACTTCCTGCTCTACGGACTGGTCGCGGCACTGGTCTTCAACTCGGAGTTCTTCCCGAACGTCAGCCCGG CGATCGGAACGCTCGCCGCGTTCGCGACGTTCGGCGTCGGATTCCTGTTCCGGCCGCTCGGTGGCGTCGTGTTCGGCCAC TACGGCGACCGCATCGGACGCAAGCGGATGCTGATCCTCACCGTGCTGATCATGGGCACGAGCACCGCTCTGATCGGGCT GCTGCCGTCGTTCGCGTCGATCGGCTGGTGGGCGCCGGTGCTGCTCGTCACGCTGCGCGCCATCCAGGGCTTCGCGGTCG GCGGCGAGTGGGGTGGGGCCGCACTGATGGCCGTCGAGAGTGCGCCGCCGAAGAAGAAGGCGTTCTACAGCAGTGGCGTC CAGGTCGGGTACTCGGTCGGACTCATCCTCGCCACCGGATTCGTCATGCTCATGAGCAACCTGACCACCGAGACCGCGTT CAGCCAGTGGGGTTGGCGTGTTCCGTTCATCGCCAGCGTCGTCCTGGTCGGAATCGGTCTGTGGATCCGCGCCGGAGTCC AGGAGAGTCCCGAATTCGTCGAGAAGGTCGAAAAGGTCGAGGACACCCCGCAGGAGAAGAAGCGGATCCCTCTCGTCGAG GCACTGCGCAACCATCCGAAGGCGTTCCTTCAGATCATCGGCCTGCGTTTCGCCGAACTGTTCTCGATGTACATCGTGAC CACGTTCGCGCTCAGCTACTCCACGCAGGAACTGGGGATGGAGCGCAACTTCATGCTCAACGTCGGTCTGCTCGTCGGCG CCGTCGGCATCGGCACCATCCCGCTGTTCGCCTGGCTGTCCGACAAGCACGGCCGTCGCCGCGTCTACATCCTCGGCGCG CTGATCGGCGCGGTGTGCGCGTTCCCGTTCTTCATCTTCCTCGAGCACGGATCGATGATCGGCACCGTCATCCTCGCCGT GCTCCTGGTCAACATCTCCCACGACATGGTCGTCAGCGTGCAGCAGCCGCTGTTCACCGAGATGTTCGGGGCGGAGTACC GGTACAGCGGTGCGGGCGTCGGATACCAGGTGGCCAGCGCGATCGGCGGCGGTTTCACCCCGTTCATCGCGGCGGCTCTG GTCACCGCCAGCGGCGGGTCCTGGCACCTCGTGGCCGTGTACCTGGCAGGCGGCTGCGTCGTCAGCGCCCTGATCGCGTG GCGACTGCAGCCCGATTCGACTGCCGACGCCGCGGGCGCCACCACGTCCGCGAAGCTCGAGAACGCGCACTGA Protein sequence : MSDHAFTPAAEKQARRAALSSFVGAVIDWYDFLLYGLVAALVFNSEFFPNVSPAIGTLAAFATFGVGFLFRPLGGVVFGH YGDRIGRKRMLILTVLIMGTSTALIGLLPSFASIGWWAPVLLVTLRAIQGFAVGGEWGGAALMAVESAPPKKKAFYSSGV QVGYSVGLILATGFVMLMSNLTTETAFSQWGWRVPFIASVVLVGIGLWIRAGVQESPEFVEKVEKVEDTPQEKKRIPLVE ALRNHPKAFLQIIGLRFAELFSMYIVTTFALSYSTQELGMERNFMLNVGLLVGAVGIGTIPLFAWLSDKHGRRRVYILGA LIGAVCAFPFFIFLEHGSMIGTVILAVLLVNISHDMVVSVQQPLFTEMFGAEYRYSGAGVGYQVASAIGGGFTPFIAAAL VTASGGSWHLVAVYLAGGCVVSALIAWRLQPDSTADAAGATTSAKLENAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 8e-139 | 69 |
