Gene Information

Name : ccmC (LHK_02088)
Accession : YP_002796081.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Virulence
Product : CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1972894 - 1973637 bp
Length : 744 bp
Strand : +
Note : ABC transporter, permease domain, ccmC, heme exporter

DNA sequence :
ATGAAGATCAACTGGATGCGCTTTGCCGCCCCGCCCCGCTTCTACATGCTGACCGGGCAGCTGCTGCCGTGGCTGTGGCT
GCTGTCGGCCCTGCTGGCGGTGGCGGGCCTGTATGTCGGGTTTTTCGTGGCGCCGACCGATTTCCAGCAGGGCGAGGGCT
ACCGCATCATTTTCGTGCATGTGCCGGCCTCGTGGATGTCGATGCTGATCTACGTCGTGGTGGCGTTCTGGAGTGCGGTG
GGGCTGGTGATGAACACCCGCCTGTCGTTCATGATGGCGCAGGCACTGGTACCGACCGGCGCCATGTTCACCTTCCTGTC
GCTCTGGACCGGCGCCCTGTGGGGCAAGCCGATGTGGGGCGCCTGGTGGGTGTGGGATGCGCGGCTGACGTCGGAGCTGA
TCTTGCTGTTCCTGTACCTCGCCATGCTGGCACTCAAGGCCGCCATCGACGACCCGCGCCGTGGCGACCGGGCCTGCGGC
CTCTTTGCACTGGTCAGCGTGGTCAACGTGCCGGTGATCTATTTCTCGGTCAAATGGTGGAACACCCTGCACCAGGGTGC
CACGGTCAGCGTGACCCAGGCGCCGTCGATGGCGCACGACATGCTGCTGGCGATGCTGCTGATGGTGTTCGCCGCCTGGG
CCTATTCGATTGCCGTCGCCTTTGTGCGCGTACGCGTGCTGATCCTGGAACGTGACATCGACACCGAATGGGTCAAACGC
ATCCTGAGGAAATCTGCCGCATGA

Protein sequence :
MKINWMRFAAPPRFYMLTGQLLPWLWLLSALLAVAGLYVGFFVAPTDFQQGEGYRIIFVHVPASWMSMLIYVVVAFWSAV
GLVMNTRLSFMMAQALVPTGAMFTFLSLWTGALWGKPMWGAWWVWDARLTSELILLFLYLAMLALKAAIDDPRRGDRACG
LFALVSVVNVPVIYFSVKWWNTLHQGATVSVTQAPSMAHDMLLAMLLMVFAAWAYSIAVAFVRVRVLILERDIDTEWVKR
ILRKSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-53 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_002796081.1 CcmC VFG1856 Protein 1e-28 47