Gene Information

Name : LHK_r15 (LHK_r15)
Accession : -
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2762983 - 2764506 bp
Length : 1524 bp
Strand : -
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGTAACAGGGACTTCGGTCT
GCTGACGAGTGGCGAACGGGTGAGTAATGCATCGGAACGTACCGAGTAATGGGGGATAACGCATCGAAAGGTGTGCTAAT
ACCGCATACGCCCTGAGGGGGAAAGCGGGGGATCGAAAGACCTCGCGTTATTCGAGCGGCCGATGCCGGATTAGCTAGTT
GGTGGGGTAAAGGCTCACCAAGGCGACGATCCGTAGCAGGTCTGAGAGGATGATCTGCCACACTGGGACTGAGACACGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGTCTGAAG
AAGGCCTTCGGGTTGTAAAGGACTTTTGTCAGGGAGGAAATCCTTAAGGCTAATACCCTTGGGGGATGACAGTACCTGAA
GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA
AGCGTGCGCAGGCGGTTTGAAAAGTCAGCTGTGAAAGCCCCGGGCTCAACCTGGGAACTGCGGTTGAAACTCTCAAGCTA
GAGTGCGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAACACCAATGGCGAAGGCA
GCCCCCTGGGATGACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATAACCTGGTAGTCCACGCCCT
AAACGATGTCGACTAGCCGTTGGAGATTTCGGTTTCTGGTGGCGCAGCTAACGCGTGAAGTCGACCGCCTGGGGAGTACG
GTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGA
AAAACCTTACCTGGTCTTGACATGTACCGAACCTCGAAGAGATTTGAGGGTGCCCGAAAGGGAGCGGTAACACAGGTGCT
GCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCAGC
ATTAAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTA
TGACCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTCGCTAAGCCGCGAGGTAGTGCCAATCTCATAAAACCG
ATCGTAGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGTCGCGGTG
AATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGAATCCGCCAGAAGTGGGTAGGGTAACCGTAA
GGAGCCCGCTTACCACGGTAGGTTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC
ACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-166 88
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-166 88
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-215 87.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-215 87.7
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-215 87.6
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-215 87.6