Gene Information

Name : nifS (LHK_02865)
Accession : YP_002796853.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : NifS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 2770136 - 2771353 bp
Length : 1218 bp
Strand : -
Note : Pyridoxal-phosphate-dependent aminotransferase

DNA sequence :
ATGAGCCAACTGAAATTCCCGATCTATCTCGACTATTCGGCCACCACCCCGATTGATCCGCGCGTGGCAGAGAAGATGAT
TCCCTTCCTGACCGAAAAATTCGGCAACCCCGCTTCGCGCAGCCACAGCTACGGCTGGGAAGCCGAGGAAGCGGTCGAGA
ACGCACGGGCCGAAGTGGCCCGGCTGATCAATGCCGATCCGAAGGAAATCATCTGGACCTCGGGTGCCACCGAGTCGGAC
AACCTGGCGATCAAGGGTGCTGCCCACTTTTACCAGAGCCGCGGCAAGCACCTCATCACCGTCAAGACCGAACACAAGGC
GGTGCTGGACACCTGTCGCGAGCTGGAGCGCGAGGGCTTTGAAGTCACCTACCTGCCGGTGCAGGAAAACGGCCTGATCG
ACCTTGAAGTGTTCAAGGCTGCCATCCGCCCGGACACCATCGTCGTGTCGGTGATGTTCGTGAACAACGAAATCGGCGTG
ATCCAGGACATTCCCGCCATCGGCGACATCTGCCGCGAAAAAGGCATCATCTTCCACGTTGACGCCACCCAGGCCCCGGG
CAAGGTCAGGATCGACCTCAGCGAACTCAAGGTCGACCTGATGAGCCTGTCGGCGCACAAGGTCTATGGCCCCAAGGGCA
TCGGTGCCCTGTACGTGCGCCGCAAGCCGCGCGTGCGCCTTGAAGCCCAGATGCACGGTGGCGGCCACGAGCGCGGTTTC
CGCTCCGGCACGCTGGCCACCCACCAGATCGTCGGCATGGGCGAGGCCTTCCGCATCGCCCGCGAGGAAATGGACGAAGA
ACAGGCCCGCATCGCCCGCCTGCGCGACCGCATGTGGAACGGCATCAAGGACATGGAAGAGGTCTACATCAACGGCGACC
TCGAACACCGCGTGCCCAACAACCTCAACGTCAGCTTCAACTTCGTCGAGGGCGAAAGCCTGATCATGGCGATCAAGGAA
CTGGCCGTGTCGTCCGGCTCGGCCTGCACCTCGGCCTCGCTGGAGCCGTCCTATGTGCTGCGCGCCCTTGGCCGCAACGA
CGAACTGGCGCACAGCTCGATCCGATTCACCCTCGGCCGCTTCACCACCGAAGAAGAAATCGACTTTGCCGTCCGGCTGC
TCAACGACAAGATCGGCAAGCTGCGCGAACTGTCGCCGCTGTGGGAAATGTACAAGGACGGCATCGACCTCAATACGGTC
GAATGGGCTGCACACTGA

Protein sequence :
MSQLKFPIYLDYSATTPIDPRVAEKMIPFLTEKFGNPASRSHSYGWEAEEAVENARAEVARLINADPKEIIWTSGATESD
NLAIKGAAHFYQSRGKHLITVKTEHKAVLDTCRELEREGFEVTYLPVQENGLIDLEVFKAAIRPDTIVVSVMFVNNEIGV
IQDIPAIGDICREKGIIFHVDATQAPGKVRIDLSELKVDLMSLSAHKVYGPKGIGALYVRRKPRVRLEAQMHGGGHERGF
RSGTLATHQIVGMGEAFRIAREEMDEEQARIARLRDRMWNGIKDMEEVYINGDLEHRVPNNLNVSFNFVEGESLIMAIKE
LAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEEEIDFAVRLLNDKIGKLRELSPLWEMYKDGIDLNTV
EWAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 5e-139 73