Gene Information

Name : Avin_02250 (Avin_02250)
Accession : YP_002797461.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : FecI family RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 217624 - 218127 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :

ATGTCGAGTCCGACGAGCGGCAAGCTGGAATCCTTTTTCAACAGCCACCACCACTGGCTGCTCCGGCACGTGCAACGCCA
GTTGAGCAACCGGGCCGACGCGGAAGACACCGCATCGGAAACCTTCTGCCAGGTGTTGAGCTCCCGTATCGACACGGACG
AAATCCAGCAACCCCGCGCCTACCTGTCGACCATTGCGCGCCGCCTGATGTTCGACCGCTACCGGCGGCGTCAACTGGAG
AAAACCTATCTCGACTATCTGGCCACGCTTCCCGAAGGGCTGGCGCCCTCAGCGGAAGAAAGAACGCTGCTGCAGGAAGC
CCTGACGCTGATCGACCGAACCCTGGACGGCCTCCCGCTGGCGGTGAAAACGGCCTTCCTCTATAGCCAGATCGATGGCC
TCGGCTATACCGAGATCGCGCAATTGCTGGGTGTTTCCGAACGCACGGTCAGGCGCTACATGAAACAGGCCTTGAGCCAC
TGCTACCTGATCGATCTTCCATGA

Protein sequence :

MSSPTSGKLESFFNSHHHWLLRHVQRQLSNRADAEDTASETFCQVLSSRIDTDEIQQPRAYLSTIARRLMFDRYRRRQLE
KTYLDYLATLPEGLAPSAEERTLLQEALTLIDRTLDGLPLAVKTAFLYSQIDGLGYTEIAQLLGVSERTVRRYMKQALSH
CYLIDLP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-29	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Avin_02250	YP_002797461.1	FecI family RNA polymerase sigma factor	VFG1049	Protein	4e-30	47