Gene Information

Name : Avin_22650 (Avin_22650)
Accession : YP_002799431.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2262047 - 2262571 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGCCTCCTCGCAAGTCTCCCCCGCACTGCGCCTCCAGGTTCTCCATCGCCTGTTCGGCGAGCATCACGGCTGGCT
GTTCGGGCGGTTGCGCGCCCGGCTCGGCTGCGCCCACGACGCCGCCGACATCGCCTCGGAAACCTTCACCCAGGTGGTCG
CCCTGGACGATCCCGGCGCCATCCGCGAGCCGCGCGCCCTGCTCACCACCATCGCCAAGCGCCTGATCTACGCCAGTTGG
CGCCGCCGCGACCTGGAACGCGCCTACCTGGAAGTCCTGGCGCAGCAGCCGGAGGCCGTCCAGCCTTCTCCCGAGGAAAC
CGTCCTGGCCCTGGAAGCCCTGGCGGCCATCGACCAGTTGCTCGACGGGCTGTCCCCGAAGGCCCGCGCGGCCTTTCTCT
ACAGTCAACTGGAAGGCTTGAACTATACGGAGATCGCCAGCCGCCTGGGCGTATCCGTCACCCGCGTGCACCAGTACGTG
GTCAAGGGGCTGACCACCTGCTACCTGGCGCTCGAAGCGGCATGA

Protein sequence : 
MTASSQVSPALRLQVLHRLFGEHHGWLFGRLRARLGCAHDAADIASETFTQVVALDDPGAIREPRALLTTIAKRLIYASW
RRRDLERAYLEVLAQQPEAVQPSPEETVLALEALAAIDQLLDGLSPKARAAFLYSQLEGLNYTEIASRLGVSVTRVHQYV
VKGLTTCYLALEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-31 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_22650 YP_002799431.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 2e-31 47