Gene Information

Name : ccmF (Avin_30400)
Accession : YP_002800180.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 3150753 - 3152726 bp
Length : 1974 bp
Strand : -
Note : -

DNA sequence :
ATGATTCCCGAACTCGGCCACCTGGGGATGATCCTCGCCCTGTGCCTGGCGCTGGTGCAGGGCACCTTGCCGCTGATCGG
CGCCTGGCGTGGCGACCGCCTGTGGATGGGCCTGGCCGTGCCGGCCGCCTGGGGGCAGTTCGCTTTCCTGTCGTTCGCCT
TCGTCTGTCTGACCCAGGCTTTCCTGGTCGACGACTTCTCGGTCGCCTACGTGGCCGGCAACTCCAACAGCGCCTTGCCC
TGGTACTACAAGCTGAGCGCCGTGTGGGGCGCCCACGAAGGATCGCTGCTGCTCTGGGCGCTGATCCTCTCCGGCTGGAC
CTTCGCGGTGTCGGTCTTTTCCCGGCAACTGCCCGAGGAGATGCTGGCCCGCGTGCTGGGCGTGATGGGGCTGATCAGCG
TCGGCTTCCTGCTGTTTCTGATCGTCACCTCCAACCCCTTCGCCCGCCTGTTGCCGCAGACGCCGGTCGATGGCCGCGAC
CTCAACCCGCTGTTGCAGGACTTCGGCCTGATCGTCCATCCGCCGATGCTCTACATGGGTTACGTCGGCTTCTCAGTGGC
CTTCGCCTTCGCCATCGCCGCGCTGCTCGGCGGGCGCCTCGATGCCGCCTGGGCGCGCTGGTCGCGGCCCTGGACGCTGG
TCGCCTGGGCCTTTCTCGGTATCGGCATCGTGCTCGGCTCCTGGTGGGCCTATTACGAGCTGGGCTGGGGCGGCTGGTGG
TTCTGGGACCCGGTGGAGAACGCTTCCTTCATGCCCTGGCTGCTGGGCACCGCACTGTTGCACTCGCTGGCGGTGACGGA
GAAGCGCGGGGTGTTCAAGAGCTGGACGGTGCTTCTGGCCATCGCCGCCTTCTCGCTGAGCCTGCTCGGCACCTTCCTGG
TGCGTTCCGGGGTGCTGACTTCGGTGCATGCCTTCGCCAACGATCCGGAGCGCGGCGTGTTCATCCTGATCTTCCTGCTG
GTGGTGGTCGGCAGTTCGCTGACCCTGTTCGCCATCCGCGCGCCGGTGGTCAGGAGCCAGGTGGGCTTCGCCCTCCGCTC
GCGGGAAACCCTGCTGCTGGTGAACAACCTGCTGCTGGTGGTGGCGACCTCGACCATCCTGCTCGGCACGCTCTATCCGC
TACTGCTGGATGCGCTGTCCGGCGCCAAGCTGTCGGTCGGGCCGCCGTACTTCAATGCGCTGTTCCTGCCGCTGATGGGG
CTGCTGATGCTGACGCTGGCGGTCGGCGTGCTGGTGCGCTGGAAGGACACGCCGCTGCGCTGGCTGTCCGGCATGCTCGC
GCCGGTACTGCTGGCCAGCGTGGCGCTGGCCCTGCTGGCCGCCTTCGTGCTCGGCGATTTCGCCTGGGCGGTGCTGGCGA
CCGCTTTCCTGGCGGCCTGGGTGGTTCTCGCCGGGGCGCGCGACCTGCTCGACAAGACCCGCCACAAGGGACTGCTCAAG
GGCCTGCACGCGCTTTCGCCGAGCTACTGGGGCATGCAACTGTCCCACCTGGGGATCGCCGTCTGCGCCCTGGGCATCGT
CCTGAGCAGCCAGGAAAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGATGCCGTGGAACTGGGCGGCTACCGCTTCG
TCTTCGAGGGCACCCGCCACCATGAGGGGCCCAACTTCGTCGCCGACCGGGCCAGCGTCCGCGTCTTCGACGGCGACGAC
GAGGTGGCCGTGCTGCACCCGGAGAAGCGTCTCTATACCGTGCAGCGGATGCCGATGACCGAGGCCGGCATCGACGCAGG
TTTCACCCGCGACTTCTACGTCGCCCTGGGCGAGCCGCTGGAAAACGGCGCCTGGGCGGTCCGCCTGCATATCAAGCCGT
TCGTCCGCTGGATCTGGCTGGGGGGCCTGATGATGGCTTTCGGCGCGGCGCTGGCGGCCTGCGACCGGCGTTATCGGGTC
AAGGTCAGGGCCCGCGTGCGCGAGGCTCTGGGCCTGGCCGGACAAGGAGCCTGA

Protein sequence :
MIPELGHLGMILALCLALVQGTLPLIGAWRGDRLWMGLAVPAAWGQFAFLSFAFVCLTQAFLVDDFSVAYVAGNSNSALP
WYYKLSAVWGAHEGSLLLWALILSGWTFAVSVFSRQLPEEMLARVLGVMGLISVGFLLFLIVTSNPFARLLPQTPVDGRD
LNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGIVLGSWWAYYELGWGGWW
FWDPVENASFMPWLLGTALLHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFANDPERGVFILIFLL
VVVGSSLTLFAIRAPVVRSQVGFALRSRETLLLVNNLLLVVATSTILLGTLYPLLLDALSGAKLSVGPPYFNALFLPLMG
LLMLTLAVGVLVRWKDTPLRWLSGMLAPVLLASVALALLAAFVLGDFAWAVLATAFLAAWVVLAGARDLLDKTRHKGLLK
GLHALSPSYWGMQLSHLGIAVCALGIVLSSQESAERDLRMAPGDAVELGGYRFVFEGTRHHEGPNFVADRASVRVFDGDD
EVAVLHPEKRLYTVQRMPMTEAGIDAGFTRDFYVALGEPLENGAWAVRLHIKPFVRWIWLGGLMMAFGAALAACDRRYRV
KVRARVREALGLAGQGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-113 58