Gene Information

Name : secF (Avin_40450)
Accession : YP_002801156.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 4094763 - 4095677 bp
Length : 915 bp
Strand : -
Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f

DNA sequence :
ATGAAGCGTGTCATCAATTTCATGGGTATCCGCCGGGTCGCTTTCGTCGCGACCCTGGTGCTGACCCTGTTGTCCCTGGT
CAGTCTGGCTGTCCGGGGGCTGAATTTCGGTCTGGATTTCACCGGCGGTACCCTCATCGAACTGAGCTATGAGCGTCCGG
TCGAGCTGTCGGACGTGCGTGCCGGACTGGAGACGGCCGGCTACGGCGATGCCCTCGTGCAGAGTTTCGGGGCGACCACC
GATGTGCTGGTGCGCCTGAAGGGTGACGATCCGCAACTGGGCGAGAAGGTGGCATCGGCACTGCGCCAATCCGCCTCCGA
CAATCCGATGACGGTCAAGCGGGCCGAGTTCGTCGGCCCGGCGGTGGGCGAGGAGCTGCGCGACCAGGGTGGTCTGGGCA
TGCTGCTGGCGCTGGGGGGGATACTGGTCTACGTGGCTTTCCGCTTCCAGTGGAAGTTCGGCTGCGGCGCGGTGCTGTCC
CTGTTCCACGACGTCATCGTCACCCTCGGTGTCTTTTCCTTTCTCCAGATCCCCTTCGATCTCACGGTGCTGGCCGCTGT
GCTGGCGATCATCGGTTATTCGCTGAACGACACCATCGTGGTGTTCGACCGCATCCGCGAGAATTTCCGCCTGCTGCGCA
AGGCCGACCTGGTCGAGAACATCAATATCTCCACGACCCAGACGCTGCTGCGGACCATGGCGACTTCGATTTCCACGCTG
TTGGCGATACTGGCCTTGATGCTGTTCGGTGGCGAGCCGCTTTGGGGCTTTTCCCTGGCGCTGTTCATCGGGGTGATGGC
CGGCACCTATTCCTCGATCTACATTGCCAACGTCGTGCTGATCTGGCTGAAGCTGACCCGCGACGACCTGATTCCTCCGG
TGGCCCAGGAGGCCGAGACGGACCTGCGGCCTTGA

Protein sequence :
MKRVINFMGIRRVAFVATLVLTLLSLVSLAVRGLNFGLDFTGGTLIELSYERPVELSDVRAGLETAGYGDALVQSFGATT
DVLVRLKGDDPQLGEKVASALRQSASDNPMTVKRAEFVGPAVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGCGAVLS
LFHDVIVTLGVFSFLQIPFDLTVLAAVLAIIGYSLNDTIVVFDRIRENFRLLRKADLVENINISTTQTLLRTMATSISTL
LAILALMLFGGEPLWGFSLALFIGVMAGTYSSIYIANVVLIWLKLTRDDLIPPVAQEAETDLRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 5e-94 76
secF AAT96066.1 SecF Not tested T-PAI Protein 2e-94 76