Gene Information

Name : Avin_40940 (Avin_40940)
Accession : YP_002801204.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : FecI family RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4130232 - 4130732 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence :

ATGCCCGTTCAGCCTCCCGGCCCCTTCCACACCCTCTACAGCCAGCATCACGACTGGCTGAAAGGCTGGCTGCGCAGCCG
CATCGGCAACACCAGCGACGCCGCCGACCTGGCCCAGGACACCTTCATGCGCGTGCTGGCGAACCGTAACGCCGACGGCA
TCCGCGAGCCGCGCACCTACCTGAGCACCATCGCCCGCGCCCTGCTGATCGACCACTTCCGCCGCCAGAGCATCGAGCGC
GCCTACCTGGAAGCACTGGCCGCGCGCCCCGAGCCGCTGGCCATCTCCCCCGAGACGCGGCTGGCCATCCTGGAAACCCT
CACCGCCATCGACGCCATGCTCGATGGACTGGGCGAACGCACCCGCGCGATCTTTCTCGCCGTCCAGCTCGAAGGGCTCG
GCTACGCAGCCGTGGGCGAACGCCTCGGCGTCTCGGTCACCACCGTGAAAAAACACCTGATCCGCGCCATGACCCACTGT
CTGCTGCTGATGGACGACTGA

Protein sequence :

MPVQPPGPFHTLYSQHHDWLKGWLRSRIGNTSDAADLAQDTFMRVLANRNADGIREPRTYLSTIARALLIDHFRRQSIER
AYLEALAARPEPLAISPETRLAILETLTAIDAMLDGLGERTRAIFLAVQLEGLGYAAVGERLGVSVTTVKKHLIRAMTHC
LLLMDD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	4e-34	50

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Avin_40940	YP_002801204.1	FecI family RNA polymerase sigma factor	VFG1049	Protein	2e-34	50