Gene Information

Name : glcB (Avin_43290)
Accession : YP_002801425.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 4369897 - 4372074 bp
Length : 2178 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACCGAGCGTGTGCAGTGCCAGCGCTTGCAGGTGGCAAGCCAGTTCAAGCGTTTCATCGACGAGGAAGTGCTCCCCGG
CACCGGCATCGACGCCACGGCCTTCTGGAGCGGCCTGGACGACCTGGTGCACGACCTGGCGCCGCAGAACCGGGCCCTGC
TGGCCGAACGCGACCGCCTGCAGGGCGAGTTGGACGCCTGGCACCGGGCCAACCCCGGCCCGATCGCCGACATGGCGGCC
TACCGCCACTTCCTGGAGAGCATCGGCTACCTGCTGCCGCAGCCCGACGAGGTGAAGATCGCCACCGCCAACGTCGACGA
CGAAGTCGCCGTGCAGGCGGGCCCGCAACTGGTGGTGCCGGTGATGAACGCGCGCTATGCGCTGAACGCCGCCAATGCCC
GCTGGGGCTCGCTGTACGATGCCCTGTACGGCACCGACGCCATCGGCGAGGAAGGCGGCGCCGAGAAGAGTTCGGCCTAC
AACGCGGTGCGCGGTGCCCGCGTGATCGCCTTCGCCCGCGCCTTCCTCGACCGGGCCGCGCCGCTGGCCAACGGCAGCCA
TGCCGACGCCACGGCCTACGCCGTCGAGCGGGGCGCGTTGCGGGTGACGCTCAAGGACGGCAGCCACAGCGGCCTCGCCC
AGGCCGAGAAGTTCGTCGGCTACCAGGGCGCCGCCGAGGCGCCCGGCGCCGTGCTGCTGAAGAACCACGGCCTGCACATC
GAGATCCAGATCGATCCCGACAGCCTGATCGGCAAGAGCGATGCGGCCGGCGTCAAGGATCTGCTGCTGGAGTCCGCGCT
GACCACCATCATGGACTGCGAGGACTCGGTGGCCGCGGTGGATGCCGACGACAAGGTGCTGGTCTACCGCAACTGGCTGG
GGTTGATGAAGGGCGACCTCAGCGAGGAACTGGACAAGGGCGGGCGGCGCATCGTCCGCCGCCTCGCCCCGGACCGCCTG
TATCAGGCCGCCGGTGGCGGCGAGCTGCGCCTGCACGGCCGCGCCCTGCTGTTCGTGCGCAATGTCGGCCACCTGATGAC
CACCCCGGCGATCCTCGACGGCGAAGGCCGGGAAATCCCCGAGGGCATCCTCGACGCCGCCATCACCAGCCTGATCGCCC
TGCACGACCTCGAACGCCGGGGCAATTCGCGCACCGGCAGCGTCTACATCGTCAAGCCGAAGATGCACGGCCCGGCCGAG
GTGGCCTTCGCCGACCGCTTGTTCGGCCGCGTCGAGGATCTGCTCGGCCTGCCGCGCCACACCCTGAAGATGGGCATCAT
GGACGAGGAGCGGCGCACCAGCGTCAACCTCAAGGCGTGCATCGCCGCCGCCGGCGCGCGGATCGCATTCATCAACACGG
GCTTCCTCGACCGCACCGGCGACGAGATGCACACCACCATGGAAGCCGGCGCCATGCTGCGCAAGGAGGACATGAAGTCC
AGCGCCTGGATCCAGGCCTACGAGCGCAACAACGTGCTGGTCGGCCTGAGTTGCGGGCTGCGTGGCCGCGCGCAGATCGG
CAAGGGCATGTGGGCCATCCCGGACCGGATGGCCGCCATGCTCGAACAGAAGATCGCCCATCCGAAGGCCGGCGCCAACA
CCGCCTGGGTACCGTCGCCGACCGCCGCCACCCTGCACGCCCTGCACTACCACCAGGTCGATGTCCAGGCCGTGCAGCGC
GAGCTGGAACGGATCGATCCGGCCGCCGAGCGCGACGCCCTGCTCGATGGCCTGCTCAGCGTGCCGGTCAGCGCCGAGCG
CGCCTGGAGCGCCGAGGCCATCGAGGAAGAACTGGCCAACAACTGCCAGGGCATCCTCGGCTACGTGGTGCGCTGGGTGG
AACAGGGCGTCGGCTGCTCCAAGGTGCCGGACATCCACGACGTCGGCCTGATGGAGGACCGCGCCACCCTGCGCATCTCC
AGCCAGCACATCGCCAACTGGCTGCACCATGGCGTGGTCGGCGCGGAGCAGGTGCGCGAGGCCCTGCGACGCATGGCCAG
GGTGGTCGACGCCCAGAACGCCGGCGACCCCGCCTACCGGCCCATGGCCCGCGACTTCGACAAGTCGCACGCCTTCGGCG
CCGCCAGCGATCTGGTGTTCAAGGGACGCGAGCAGCCCAGCGGCTATACCGAACCGCTGCTGCACGCCTGGCGCCGGCGC
TTCAAGCAGGAGCGATGA

Protein sequence :
MTERVQCQRLQVASQFKRFIDEEVLPGTGIDATAFWSGLDDLVHDLAPQNRALLAERDRLQGELDAWHRANPGPIADMAA
YRHFLESIGYLLPQPDEVKIATANVDDEVAVQAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAIGEEGGAEKSSAY
NAVRGARVIAFARAFLDRAAPLANGSHADATAYAVERGALRVTLKDGSHSGLAQAEKFVGYQGAAEAPGAVLLKNHGLHI
EIQIDPDSLIGKSDAAGVKDLLLESALTTIMDCEDSVAAVDADDKVLVYRNWLGLMKGDLSEELDKGGRRIVRRLAPDRL
YQAAGGGELRLHGRALLFVRNVGHLMTTPAILDGEGREIPEGILDAAITSLIALHDLERRGNSRTGSVYIVKPKMHGPAE
VAFADRLFGRVEDLLGLPRHTLKMGIMDEERRTSVNLKACIAAAGARIAFINTGFLDRTGDEMHTTMEAGAMLRKEDMKS
SAWIQAYERNNVLVGLSCGLRGRAQIGKGMWAIPDRMAAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDVQAVQR
ELERIDPAAERDALLDGLLSVPVSAERAWSAEAIEEELANNCQGILGYVVRWVEQGVGCSKVPDIHDVGLMEDRATLRIS
SQHIANWLHHGVVGAEQVREALRRMARVVDAQNAGDPAYRPMARDFDKSHAFGAASDLVFKGREQPSGYTEPLLHAWRRR
FKQER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 65