Gene Information

Name : glcB (Avin_05920)
Accession : YP_002797820.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 572615 - 574789 bp
Length : 2175 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACCGAGCGCGTTCAAGTCGGCGGCCTGCAAGTCGCCAAAGTCCTGTATGACTTCATCAATGCCGAAGCCGTCCCCGG
CACCGGCGTCGATGTCGCCGCCTTCTGGGCCGGCGCCGCCGATGTCATCCACGACCTGGCGCCGAAGAACCGCGCCCTGC
TGGCCAAGCGCGACGAACTGCAGGCGAAGATCGACGCCTGGCACCGGGCCCGTGCCGGCCAGGGCCACGACGCCGTGGCC
TACAAGACCTTCCTGCAGGAGATCGGCTACCTGTTGCCGGAACCCGAGGATTTCGCCGCCACCACCGAGAACGTCGACGA
CGAGATCGCCCGCATGGCCGGTCCGCAACTGGTGGTGCCGATCATGAACGCGCGTTTCGCCCTGAACGCCGCCAACGCCC
GCTGGGGCTCGCTGTACGACGCGCTGTACGGCACCGACGCGATCCCCGAAGCGGGTGGCGCCGAGAAAGTCCAAGGCTAC
AACAAGGTTCGCGGCGACAAGGTCATCGCCCTCGCCCGCGCCTTCCTCGACGAGGCCGCACCGCTGGAAGGCACCTCCCA
TGCCGCCGCCACCGGCTATCGCATCGACGGCGGCAAGCTGGTCGTCGCCCTCGAAGGCGGCAGCGCCACCGGCCTGAAGA
ACCCGGCCCAACTGGTCGGCTTCCAGGGCGAGGCGGCCGCGCCCAAGGCCGTGCTGCTCAAGCACAACGGCATCCACTTC
GAGATCCAGATCGACCCGCAGAGCCCGATCGGCAAGACCGACGCCGCCGGCGTGAAGGACGTGCTGATGGAGGCCGCCCT
GACCACCATCATGGACTGCGAGGACTCGGTGGCCGCCGTCGACGCCGACGACAAGGTCATCGCCTACCGGAACTGGCTGG
GCCTGATGAAGGGCGACCTGGCCGAGCAGGTCAGCAAGGGCGGCAGCACCTTCACCCGCACCATGAACCCGGACCGCGAG
TACACCGCGGCGGGCGGCGGCGCCCTGACCCTGCACGGTCGCTCCCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAC
CAACGACGCGATCCTCGACAAGGACGGCAACGAAGTGCCGGAAGGCATCCAGGACGCGCTGTTCACCGGCCTGATCGCCC
TGCACGACCTCAAGGGCGACACCAGCCGCCGGAACAGCCGCGCCGGCTCCGTGTACATCGTCAAGCCGAAGATGCACGGC
CCCGAGGAAGTCGCCTTCACCAACGAGCTGTTCGGCCGCGTCGAGGGCGTCCTCGGCCTGACCCGCAATACCCTCAAGGT
CGGCATCATGGACGAGGAGCGCCGCACCACGGTCAACCTCAAGGCCTGCATCAAGGCCGCCCGCGAGCGCGTGGTGTTCA
TCAACACCGGCTTCCTCGACCGCACCGGCGACGAACTACACACATCCATGGAAGCCGGCCCGATGATCCGCAAGGGCGAG
ATGAAAAACGCCACCTGGATCAAGGCCTACGAGAACTGGAACGTCGACATCGGCCTGGCCACCGGCCTGTCCGGCCGCGC
GCAGATCGGCAAGGGCATGTGGGCCATGCCCGATCTGATGGCCGCCATGCTCGAGCAGAAGATCGGCCATCCGCTGGCCG
GCGCCAACACCGCCTGGGTACCGTCGCCGACCGCCGCCACCCTGCACGCCCTGCACTACCACAAGGTCGACGTGTTCGCC
CGCCAGCGGGAGCTGGCCAAGCGCAAGCGCGCCTCGCTGGACGACATCCTGAGCATCCCGCTGGCGCCGAACACCGACTG
GAGCGCCGCCGAGATCCAGCAGGAGCTGGACAACAACGCCCAGGGCATCCTCGGCTACGTGGTGCGCTGGATCGACCAGG
GCGTCGGCTGCTCCAAGGTCCCGGACATCAACGACATCGGCCTGATGGAAGACCGCGCCACCCTGCGTATCTCCAGCCAG
CACATCGCCAACTGGCTGCGCCACGGCGTGTGCAGCCTCGAGCAGGTGATGGAAACCTTCAAGCGCATGGCCCTGGTGGT
GGACCGCCAGAACGCCGGCGACCCGCTGTACCGTCCGATGGCGCCGGACTTCGACGGCGTCGCCTTCCAGGCCGCCGTCG
AGCTGTGCGTCGAAGGCACCAGGCAGCCCAACGGCTACACCGAGCCGGTGCTGCACCGCCGCCGCCGCGAATTCAAGGCC
AAGAACGCTCTCTGA

Protein sequence :
MTERVQVGGLQVAKVLYDFINAEAVPGTGVDVAAFWAGAADVIHDLAPKNRALLAKRDELQAKIDAWHRARAGQGHDAVA
YKTFLQEIGYLLPEPEDFAATTENVDDEIARMAGPQLVVPIMNARFALNAANARWGSLYDALYGTDAIPEAGGAEKVQGY
NKVRGDKVIALARAFLDEAAPLEGTSHAAATGYRIDGGKLVVALEGGSATGLKNPAQLVGFQGEAAAPKAVLLKHNGIHF
EIQIDPQSPIGKTDAAGVKDVLMEAALTTIMDCEDSVAAVDADDKVIAYRNWLGLMKGDLAEQVSKGGSTFTRTMNPDRE
YTAAGGGALTLHGRSLLFVRNVGHLMTNDAILDKDGNEVPEGIQDALFTGLIALHDLKGDTSRRNSRAGSVYIVKPKMHG
PEEVAFTNELFGRVEGVLGLTRNTLKVGIMDEERRTTVNLKACIKAARERVVFINTGFLDRTGDELHTSMEAGPMIRKGE
MKNATWIKAYENWNVDIGLATGLSGRAQIGKGMWAMPDLMAAMLEQKIGHPLAGANTAWVPSPTAATLHALHYHKVDVFA
RQRELAKRKRASLDDILSIPLAPNTDWSAAEIQQELDNNAQGILGYVVRWIDQGVGCSKVPDINDIGLMEDRATLRISSQ
HIANWLRHGVCSLEQVMETFKRMALVVDRQNAGDPLYRPMAPDFDGVAFQAAVELCVEGTRQPNGYTEPVLHRRRREFKA
KNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60