Gene Information

Name : CLM_0129 (CLM_0129)
Accession : YP_002802401.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Resistance
Product : putative macrolide efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 110913 - 111608 bp
Length : 696 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
TTGTTAACAGTTAAAGATATAGAAAAAACTTACAATACAGGAGAAATAAGTTTTAAAGCTTTAAAAGGAATATCTTTAAA
AATAGAAAGAGGAGAATTTACATCTATAATGGGTCCATCTGGTTCCGGTAAATCTACATTTATGAATATATTAGGATGTC
TAGATAAAATGGACAAGGGTGAATACATACTAAATGGTAAAGATGTAACGGATTTAACAGAAAACGATCTAGCTTATGTC
AGAAATAAAGAAATAGGGTTTGTTTTTCAGGCATTTAATTTATTACCTAGAATGACAATATTAGATAACGTAGAATTACC
AATGGTTTATGCTGGAGTACCATTAAAAGAAAGAAAAGAGCGTGCATTAAGTGCTTTAGAGAGAGTGGGACTTATAGAGA
GAATAAATCATAGACCTAATGAAATATCTGGTGGCCAAAAACAAAGGGTCGCTATAGCTAGAGCTATAGTAAACAATCCA
TCTGTTATAATGGCGGATGAACCTACAGGAAATTTAGATACAAAGTCATCATTAGATATAATGAGAATTTTTCAAAATCT
AAATGAAGAAGGTTCTACTATAATAATGGTAACTCATGAACCTGATATTGCTAAATATACTAAAAGAGTAGTTAAATTTA
GAGATGGCCATATAGTATCAGATGAAAAAGTTTTAAATAGGGAGATAGTAGAATGA

Protein sequence : 
MLTVKDIEKTYNTGEISFKALKGISLKIERGEFTSIMGPSGSGKSTFMNILGCLDKMDKGEYILNGKDVTDLTENDLAYV
RNKEIGFVFQAFNLLPRMTILDNVELPMVYAGVPLKERKERALSALERVGLIERINHRPNEISGGQKQRVAIARAIVNNP
SVIMADEPTGNLDTKSSLDIMRIFQNLNEEGSTIIMVTHEPDIAKYTKRVVKFRDGHIVSDEKVLNREIVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_0129 YP_002802401.1 putative macrolide efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-59 56
CLM_0129 YP_002802401.1 putative macrolide efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-46 47
CLM_0129 YP_002802401.1 putative macrolide efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-37 42