Gene Information

Name : CLM_3578 (CLM_3578)
Accession : YP_002805686.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3610831 - 3611586 bp
Length : 756 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGCAGTGATAGAAACAAACAATTTGGTTCGTAATTATAAATTAAATGGAAGTAATCTGAATGAGGGGACCGAGGTAAA
GGTAATAAAAGGACTAGATTTGCTTGTTGAAGAAGGAGATTTTATTGCGATTATGGGGAAGTCCGGTTGTGGAAAGACAA
CCTTAATGAAACTACTTGGATTTATTGATAAACCTACATCTGGTGAGATTATTTTCAAAGGGAGGAGCGCAAGGCAGTTT
AATAAAGATGAAGTTGCAGATATTCGAAGGAAAGAAATTGGTTTTGTGTTTCAGGACTTCTATTTGATGGATAGTCTTAC
TGTGAAAGAAAATATTATGCTCCCAATGATTCTGGAGGGAGAAGAGACAAACAAAATATTAAGTGTAACGGAAGGACTGG
GCAAGCGTTTTGAAATTAGTCATTTGTTAAATAAAAATACTTTCGAATTATCTGGAGGAGAAAAACAGCGAGTAGCTATA
TGTAGAGCGTTGATTAATGAACCAGATTTAATATTGGCAGATGAACCAACAGGTAATTTAGATTCTAAATCTGCGCAGAT
TGTAATAGATAGTTTGATGAATATTAATAAAGATATGAAGAAGACAATAATACTTGTAACCCATGATGCTCAAATTGCTA
GTTATTGTAAAAAAGTAATATTCTTAAAGGACGGAAATATTATAGGCCATATTAATAAAGAGCATAAAAAGGAAGAGTTT
TATAACGATATTATTAGAATGATAAAAAAATTATAA

Protein sequence :
MAVIETNNLVRNYKLNGSNLNEGTEVKVIKGLDLLVEEGDFIAIMGKSGCGKTTLMKLLGFIDKPTSGEIIFKGRSARQF
NKDEVADIRRKEIGFVFQDFYLMDSLTVKENIMLPMILEGEETNKILSVTEGLGKRFEISHLLNKNTFELSGGEKQRVAI
CRALINEPDLILADEPTGNLDSKSAQIVIDSLMNINKDMKKTIILVTHDAQIASYCKKVIFLKDGNIIGHINKEHKKEEF
YNDIIRMIKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_3578 YP_002805686.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-42 43
CLM_3578 YP_002805686.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 6e-28 41