Gene Information

Name : CLM_3856 (CLM_3856)
Accession : YP_002805935.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Unknown
Product : transketolase, pyridine binding subunit
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 3901691 - 3902632 bp
Length : 942 bp
Strand : -
Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780

DNA sequence : 
ATGGGAGTTAAAATAGCTACAAGAGAAGCATACGGAAAAACATTAGCTAAATTAGCAGAAGAAAATTCAAAGATAGTGGT
TTTAGATGCAGACCTTTCAAAATCTACTAAAACTGCCGACTTTAAAAAAGTTTGTCCAGAAAGATTTATAAATGTAGGAA
TAGCGGAAGGTAATATGATGGGAATAGCTGCAGGACTATCAACTTGTGGTAAGATTCCTTTTGCTAGTACTTTTGCAATG
TTTGCTACAGGAAGAGCTTTTGAACAAATAAGAAATTCAATATGTTATCCAAACTTAAATGTTAAAGTATGTGCAACACA
TGCAGGAGTTACAGTAGGAGAAGATGGAGCTTCTCACCAATCTGTTGAAGATATATCACTAATGAGAAGCATACCAAATA
TGACCGTTATTTGCCCCAGTGATGCAGTAGAAACAGAAGCAGCTATAAGAGCTGTAGCAGAATATAATGGACCATGTTAT
GTAAGATTAGGAAGATCAGGAGTTCCAGTTATAAATGATAACAAAGAGTATAAATTTGAGATAGGAAAAGGAATAAAGTT
AAGAGAAGGAAAGGAAGCTACTATAATAGCTACAGGAATAATGATAGATGCAGCATTAGAAGCTTATAATATGTTGGCTG
AAGAGGGGATAAAGGTAAATGTTATAAACATACATACCATAAAACCTATAGATAAAGATATTATTATAGACGCTGCAAGA
AAAACTGGAGTAGTAATTACAGCAGAAGAACATAGCATAATAGGCGGGTTAGGATCAGCTGTATGTGAAGTTTTAAGTGA
AAACCATCCAGTACCAGTTCTAAGAGTAGGAATAAAGGATACCTTTGGTGAAAGTGGTAAACCTGCAGAGTTATTAAAAA
AATATGAATTAACATCAGAAGATATAGTAAAGGCTGTAAAAAAGGGATTAAAATTAAAATAG

Protein sequence : 
MGVKIATREAYGKTLAKLAEENSKIVVLDADLSKSTKTADFKKVCPERFINVGIAEGNMMGIAAGLSTCGKIPFASTFAM
FATGRAFEQIRNSICYPNLNVKVCATHAGVTVGEDGASHQSVEDISLMRSIPNMTVICPSDAVETEAAIRAVAEYNGPCY
VRLGRSGVPVINDNKEYKFEIGKGIKLREGKEATIIATGIMIDAALEAYNMLAEEGIKVNVINIHTIKPIDKDIIIDAAR
KTGVVITAEEHSIIGGLGSAVCEVLSENHPVPVLRVGIKDTFGESGKPAELLKKYELTSEDIVKAVKKGLKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 3e-44 48
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 1e-48 43
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 1e-48 43