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Name : rtxB (VCM66_1404) Accession : YP_002810171.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Virulence Product : RTX toxin transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1504200 - 1506362 bp Length : 2163 bp Strand : - Note : - DNA sequence : GTGATAGGATGCCGCCCTTTCAAAAATGCTGTAATACATCGGCGAAATAATTTAATGATATCCAACAATGAAAGACTCAC GCTGATATGCATTCATTTTTATTTAAGTATCATCAGCGGTAATCGAGAAAAAATAAAAGACGAAAGTCATTTAACTGACA CTGAAAACTTCAAAGAAGAACTGGATAAAATACAGAAAGAACACAAAGTCAAAATACGCACAAAAATTTCACAATTTAAA AACATCGAATCACTAAAAACACCTGCAATTTTATTTGATCAGCACGACTTACCATTTATTACAGCAAAGACTAATAAAGA TAAATGTTTAATACAAAGACCTAATAAAGAAACTCCCGAAGTTATCTCTTCTCACGAACTTAATTCTACTTGGAATAAAA AATCGTTAGTAATACAGCAAGCACAATCGCGCTTTGATATCACTTGGTTCATTCCTGAATTCCTCCAGCATAAAAGAGTG CTGAGCGAAATTCTTTTATTTTCGTTCGTGCTGCAAATTCTGGCTCTGATCTCACCTCTGTTTTTTCAAGTGGTGATGGA TAAAGTGCTGGTCCACCAAGCTTGGTCGACGTTGGATGTACTGGTATTTGGTCTAGTGATTACAGGGGTGATCGAAGTGG TGTTACGCGGATTGCGCGAATATCAGTATGCCCATACCGCCAACCGAATTGACATACAGCTTGGACTCAAACTGGTGCAG CATCTGTTTGGACTGCCGCTCATGTTTTTTAAATCACGCCAAGTCGGCGCGATTGTCACGCGTGTGCGCGAGCTCGACAC CATTCGCGAGTTTTTGACTGGCTCTATGTTTACCTTAACGGTCGAGCTACTGTTTATGTTCGTCTTTCTTTACGTCATGA GCTTACTTTCTGCTCCGCTCACAGGGCTATTTATCGCTACTGTGCCCTGTTATGTCCTTCTCGCTTGGTGGCTCACACCA AGAATGCAGGCGGCGATTGAAAAGCAGTTTTCACATGCTGCGGCAAATACCTCATTTCTCACTGAAACCGTAGCCGGTAG TGAAACGCTGAAAAGTTTGGCGGTTGAGCCGCGATTTATCCGACGCTGGGATGAACAAACCGAAAAAATGGTCACAACGG GTTATGACGTCCAGCAGCTTAATAACCGTTCTAACCATTTAGTGCAGTTGCTGCAAAAAATCACCAGCGTCGCCATTTTA TGGTTGGGGGCGACGGAAGTGCTCTCACTTGAGATGACCATTGGTCAACTGATCGCTTTCAACATGATGACCAACCACAT TGCGCAGCCCTTAGCGCGGATGGTCGAGCTGTGGGGACAATTTATTCAAACTCGGGTCGCCATCGAGAAGCTCGGCGATA TGCTTAACCTACCAGTAGAACAACACACAGGGAGTGACAATGTCACTATAAGCGGCGCTATTAGTTTCAAAAACATCCTC TTTCGTTATCAACCGGATATTCCTCCTACCATTAATGATTTGTCGCTAGACATCCGTGCAGGTGAAACATTGGGGGTGGT CGGCACCTCGGGCTCAGGCAAAAGCACCCTCGCCCGTCTGTTGTTGCGACTTTATAGCCCTGAGCAAGGCAGTATTACCA TTGACGGCATTCCACTCAATCACATCAATGTTCAACAGCTCAGACAGCGAGTGGGTGTGGTATTGCAAGAGAACTTTTTA TTTCACAAAAGCGTGAGTGAAAATATTGCCCAATCTAAGCCTGAGGCAAGTTTGGAAGAGATCATTGAGGCTGCAAAACT CTCGGGCGCACATGACTTCATCCTCAAACTTCCCATGGGTTACGACACGGTATTAGCAGAAGGTGGTCAATCGCTTTCAG GTGGTCAACGGCAGCGTCTCGCGATTGCACGCACCCTTTTATCAGATCCGAAAGTGCTGATTTTGGATGAAGCAACCAGT GCGCTGGATGACGAATCTCAAGCCGTCATTCAAGCCAATATGGCCAGCATTGCCAGAGGCCGTACGGTGATCACGATTGC TCATCGCTTGTCTACGGTGCGTGATTGCGATCGCATCATAGTGCTTCATCAGGGCACGATTGTTGAGCAAGGCTCACACC AACAATTACTCGCCTACGGCAAACAATACAAACAGTTATGGCAGCTTCAGCAAGAGCTCAAACAAGAGGAAGCCTCCGCA TGA Protein sequence : MIGCRPFKNAVIHRRNNLMISNNERLTLICIHFYLSIISGNREKIKDESHLTDTENFKEELDKIQKEHKVKIRTKISQFK NIESLKTPAILFDQHDLPFITAKTNKDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRV LSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQ HLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTP RMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAIL WLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISGAISFKNIL FRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFL FHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATS ALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 6e-116 | 45 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 4e-116 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 4e-116 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rtxB | YP_002810171.1 | RTX toxin transporter | VFG1501 | Protein | 2e-116 | 45 |
| rtxB | YP_002810171.1 | RTX toxin transporter | VFG0907 | Protein | 3e-116 | 45 |
| rtxB | YP_002810171.1 | RTX toxin transporter | VFG1557 | Protein | 2e-116 | 45 |
| rtxB | YP_002810171.1 | RTX toxin transporter | VFG1269 | Protein | 3e-117 | 44 |
| rtxB | YP_002810171.1 | RTX toxin transporter | VFG0841 | Protein | 2e-110 | 42 |
