Gene Information

Name : NGR_c24490 (NGR_c24490)
Accession : YP_002826959.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 2547456 - 2548016 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAACGCCTATCAGAGAAAGAAGCAGCCGGAGCGGGTCCGCCAGCAATTGCTGGACGTCGCCGCACGGCTATCGCT
CGAGCAGGGGATTGCCGCGGTCACACTTGAAAAGGTGTCGCAGGCGGCTGGGGTCAGCAAGGGCGGCCTGCTGCACCATT
TCCCCAACAAGCTCGCTTTGCTGGACGGCCTATTCGACGAACTGATCGGCCGCTTCGACCGGGCGATCGAAGCGGCAATG
GCGGACGACGAGGTGGATCAGGGGCGGTTCACCCGCGCCTATCTCACCGTCTGCTTTGCGCTCGACGCGGAAGCGGAAGG
GCAGGGCTGGCGCGTGCTGACGATCGCGCTGCTTGCGGAGCCGCATCTGAAGGCGCGCTGGCGGGAATGGGTGGAGCGAC
GGTCGGGCGAGTTCGCCGCGACCGACGGTTCGCCGAATTGCCTTCTCGCCCGGTTCGCCGCCGATGGCATCTGGCTGGCC
GACCTCATGCAGAGCCATGACATCGATGCGTCGGCTCGGACCGTCCTGCTCCGGAAGCTCAAGGCGCTTTCCCTGCAGTG
A

Protein sequence : 
MTNAYQRKKQPERVRQQLLDVAARLSLEQGIAAVTLEKVSQAAGVSKGGLLHHFPNKLALLDGLFDELIGRFDRAIEAAM
ADDEVDQGRFTRAYLTVCFALDAEAEGQGWRVLTIALLAEPHLKARWREWVERRSGEFAATDGSPNCLLARFAADGIWLA
DLMQSHDIDASARTVLLRKLKALSLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42082.1 hypothetical protein Not tested PAI II 536 Protein 2e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c24490 YP_002826959.1 TetR family transcriptional regulator VFG1601 Protein 7e-32 43