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Name : glcD2 (NGR_c03920) Accession : YP_002824941.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 438119 - 439558 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGCCGGAGACGATCGGATTCCTGAAACCCAGGCAGGCCGTCCTCGACCGCCGGCCGGAGATCATTGCCGACCTCGCCGA CCTCCTGCCGGAGGGTTGCCTGATCAGCGACGAACGCGGGCTGAAGCCCTTCGAGACGGACGCATTTCTCGCCTATCGCC GCCTGCCGCTCGCCGTTGTGCTCCCGGAGACGACCGAGCAGGTCTCCGCGGTCCTCAAATATTGCAGTCGCTACGGCATC CCGGTCGTGCCGCGCGGGGCCGGCACGTCGCTCTCCGGCGGCGCCATCCCGCAGGAAGACGCGATCGTCATCGGTCTCTC GAAGATGTCGCGCATTCTCGATGTCGATCTCTTCAACCGGACGGCGACGGTCCAGGCGGGGGTCACCAATCTCAACATTT CCGACGCGGTGAGCGCCGACGGCTTCTTCTACGCCCCCGATCCGAGCTCCCAGCTCGCCTGCACGATCGGCGGCAACATC GGCATGAATTCCGGCGGCGCCCACTGCCTGAAATACGGCGTCACGACCAACAACCTCCTGGGCGTCAAGATGGTGCTCTT CGACGGCACGGTGATCGAGCTCGGCGGCAAGGCGCTGGATTCGTCCGGCTACGATCTGCTCGGCCTCGTCTGCGGCTCGG AAGGCCAGCTCGGCATCGTCACCGAGGCGACGGTGCGGCTGATCGCCAAGCCGGAAGGGGCGCGCCCCGTATTGTTCGGC TTCGCCTCGTCGGTCGCGGCCGGTTCCTGCGTCGCCGATATCATCGGGTCGGGCATCATCCCAGTGGCGATCGAGTTCAT GGACAAGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCATGCCGGCTATCCGCTCGACGTTGAGGCGCTGCTGATTGTCG AGGTCGAGGGGTCGGAGGCGGAGATGGACACGATGCTTGAGAGCATCATCGCGATCGCCCGCCGTCACGGCGTCATGACG ATCAAGGAATCGCAGTCGGCGCTCGAGGCGGCGCTGATCTGGAAAGGCCGGAAATCCGCCTTCGGTGCCACCGGGCGGGT CGCCGACTATATTTGCATGGACGGCACGGTGCCGCTCAGCCAGCTCTCCCATGTGTTGCGTCGGACCGGCGAGATCGTCG CGAGCTACGGGCTCCGCGTCGCCAACGTCTTCCATGCCGGCGACGGCAATATGCATCCGCTGATCCTCTACAACATCAAC GATCCGGAGGATGCGGCCCGCGCTGAAGCGGCCGGCAACGACATCCTGAAGCTCTGCGTCGATGCGGGCGGCTGCCTGAC GGGCGAGCACGGTGTCGGCATCGAAAAGCGGGATCTGATGCGGCATCAGTACAACAAGGCCGACCTCGACCAGCAGATGG CCGTGCGCGCCGCCTTCGATCCGCAATGGCTTTTGAACCCGTCGAAGGTATTTCCGCTCGAAGGACGGCCTGCGGCATGA Protein sequence : MPETIGFLKPRQAVLDRRPEIIADLADLLPEGCLISDERGLKPFETDAFLAYRRLPLAVVLPETTEQVSAVLKYCSRYGI PVVPRGAGTSLSGGAIPQEDAIVIGLSKMSRILDVDLFNRTATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVKMVLFDGTVIELGGKALDSSGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG FASSVAAGSCVADIIGSGIIPVAIEFMDKPAIEICEAFAHAGYPLDVEALLIVEVEGSEAEMDTMLESIIAIARRHGVMT IKESQSALEAALIWKGRKSAFGATGRVADYICMDGTVPLSQLSHVLRRTGEIVASYGLRVANVFHAGDGNMHPLILYNIN DPEDAARAEAAGNDILKLCVDAGGCLTGEHGVGIEKRDLMRHQYNKADLDQQMAVRAAFDPQWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-100 | 49 |
