|
Name : rnhA (NGR_c05350) Accession : YP_002825084.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 589186 - 589647 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAGCACGTCGACATCTTTACCGACGGCGCCTGCTCGGGAAACCCCGGGCCTGGCGGCTGGGGCGCGGTGCTGCGCTA CGGCGAGGTGGAGAAGGAGATGTTCGGTGGCGAAGCGGAGACCACCAACAACCGCATGGAACTGATGGCTGCGATCTCCG CCCTGAACGCCCTGAAGCAGCCCTGCGAGGTCGATCTGCACACCGACAGCAAATATGTCATGGACGGCATCTCGAAATGG ATTCACGGCTGGAAGCGCAACGGCTGGAAAACCGGCGACAGGAAGCCGGTGAAGAACGGCGAGCTCTGGCAGGCGCTCGA TGAGGCGAGGGACCGCCACCAGGTGACCTGGCACTGGGTCAAGGGGCACGCCGGCCATCCGGAGAACGAGCGTGCCGATG AACTTGCCCGCAAGGGCATGGAGCCGTTCAAGAAGGTGCGCCGCACGGATGCGGTGAAATAA Protein sequence : MKHVDIFTDGACSGNPGPGGWGAVLRYGEVEKEMFGGEAETTNNRMELMAAISALNALKQPCEVDLHTDSKYVMDGISKW IHGWKRNGWKTGDRKPVKNGELWQALDEARDRHQVTWHWVKGHAGHPENERADELARKGMEPFKKVRRTDAVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-39 | 58 |
