Gene Information

Name : LS215_1242 (LS215_1242)
Accession : YP_002831898.1
Strain : Sulfolobus islandicus L.S.2.15
Genome accession: NC_012589
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1160215 - 1160898 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGTATATGCCCGTAATAAGACTTGAAAATGTTACCAAGATTTATGAGGGGAATGTAAAGACTGTTGCGCTTAGAGATAT
AAACCTAAGTATTGATGAAGGAGAGTTTATTTCAATATTGGGACCTTCTGGCAGTGGAAAATCAACTCTCTTATCAATCT
TAGGAATTTTGGATAGACCATCACAAGGGAAGGTATATATTTATGAAATGGACGTAACTAAGCTAAGCGATAACGAAATC
TCAAAAATCAGAAATGAGTATATAGGCTTTGTATTTCAGAATTTTAATCTAATTCAGAGGCTTAGTGTACTACAAAACGT
TGAATTACCACTAGTAGCCAGAGGAATACCAAAAAAGAAAAGGGAGGAGATAGCAATAAATTCTCTAAAACTAGTGGAAT
TAGACGGAGTAATAAACAAAAGACCGTCAGAACTTTCTGGGGGACAACAGCAAAGAGTAGCTATAGCTCGTGCATTAGCC
CAAAATCCAAAGATCATATTAGCTGATGAACCTACTGGAAATTTAGATAGTATCAATGCAAAAATTGTAATGGACATATT
CAAAAAGATTAATGAGGAGTTTAAAACTACGATAGCAGTAGTAACACATGATAGAGAAGTTGCGAGTTTTACAAGGAGAA
AGATCTACATCAGAGATGGAAAGATAGTTGGTGAAGAAAGATGA

Protein sequence : 
MYMPVIRLENVTKIYEGNVKTVALRDINLSIDEGEFISILGPSGSGKSTLLSILGILDRPSQGKVYIYEMDVTKLSDNEI
SKIRNEYIGFVFQNFNLIQRLSVLQNVELPLVARGIPKKKREEIAINSLKLVELDGVINKRPSELSGGQQQRVAIARALA
QNPKIILADEPTGNLDSINAKIVMDIFKKINEEFKTTIAVVTHDREVASFTRRKIYIRDGKIVGEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LS215_1242 YP_002831898.1 ABC transporter NC_012469.1.7686878. Protein 3e-47 49
LS215_1242 YP_002831898.1 ABC transporter NC_008702.1.4606598. Protein 7e-38 45
LS215_1242 YP_002831898.1 ABC transporter CP001581.1.gene798.p Protein 4e-35 44
LS215_1242 YP_002831898.1 ABC transporter CP001581.1.gene598.p Protein 6e-37 42
LS215_1242 YP_002831898.1 ABC transporter NC_012469.1.7686946. Protein 5e-23 41