Gene Information

Name : YG5714_0952 (YG5714_0952)
Accession : YP_002837146.1
Strain : Sulfolobus islandicus Y.G.57.14
Genome accession: NC_012622
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 883885 - 884583 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAAATTACATAATTGAGGCTATAAATTTGAAAAAAGTCTATAAAAGTAAAAAGGTTGAATATGTTGCACTTAGAGG
TGTATCATTAAAAGTAAAGAACGGTGAATTTATAGTCATTGCAGGACCCTCTGGTTCAGGAAAGACTACATTGCTTGATT
TATTAGGTTTACTTGACTCGCCAACTGAAGGAAGAATAATAATAAATAATCAAGATGTAACAAATTTTGATGAGGATAAA
AGAGCTATTTTCAGACGAAAGTATATTGGTTTTGTATTTCAATCCTATAATTTAATTACTTATTTAACAGTCTTAGAAAA
TGTAGAGTTAGCGTTAGCTACTGCTGGTGTGCCAGTTTGGAGAAGGAGAGAAAAAGCTGAAGAAATCCTTTCCATGATTC
CTGGAATGTTAGAACTGAAGAACAAGAAGCCTAATGAACTATCTGGAGGACAGCAGCAAAGAGTAGCTATTGCAAGAGCA
TTAGCAAACGATCCAAAAATATTATTACCAGATGAGCCAACAGCTAATCTAGATTCGAAAACTGGAGAAGCAATCGTTGA
ATTAATTAAAAAACTTAACGAGCAGAGAGGGGTTACAGTAGTCATGGCTACTCATGATCCTGATATGATGAAATATGCAG
ATAGAATAATTTATATTAGAGATGGATTAATTGAGAAAGAGGTGATACAAAACGAATAA

Protein sequence : 
MSNYIIEAINLKKVYKSKKVEYVALRGVSLKVKNGEFIVIAGPSGSGKTTLLDLLGLLDSPTEGRIIINNQDVTNFDEDK
RAIFRRKYIGFVFQSYNLITYLTVLENVELALATAGVPVWRRREKAEEILSMIPGMLELKNKKPNELSGGQQQRVAIARA
LANDPKILLPDEPTANLDSKTGEAIVELIKKLNEQRGVTVVMATHDPDMMKYADRIIYIRDGLIEKEVIQNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-25 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YG5714_0952 YP_002837146.1 ABC transporter NC_012469.1.7686878. Protein 4e-35 49
YG5714_0952 YP_002837146.1 ABC transporter CP001581.1.gene598.p Protein 8e-31 48
YG5714_0952 YP_002837146.1 ABC transporter NC_008702.1.4606598. Protein 6e-29 46
YG5714_0952 YP_002837146.1 ABC transporter CP001581.1.gene798.p Protein 2e-25 42
YG5714_0952 YP_002837146.1 ABC transporter NC_012469.1.7685735. Protein 3e-27 41