Gene Information

Name : rrs (RAF_RNA26)
Accession : -
Strain : Rickettsia africae ESF-5
Genome accession: NC_012633
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 893136 - 894646 bp
Length : 1511 bp
Strand : -
Note : -

DNA sequence : 
GACAGAATCAAACTTGAGAGTTTGATCCTGGCTCAGAACGAACGCTATCGGTATGCTTAACACATGCAAGTCGAACGAAC
TAATTTTTGGGGCTTGCTCCAATTAGTTAGTGGCAGACGGGTGAGTAACACGTGGGAATCTACCCATTAGTACGGAATAA
CTTTTAGAAATAAAAGCTAATACCGTATATTCTCTGCGGAGGAAAGATTTATCGCTGATGGATGAGCCCGCGTCAGATTA
GGTAGTTGGTGAGGTAATGGCTCACCAAGCCGACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAG
ACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGAGTG
AGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTTAGCAAGGAAGATAATGACGTTACTTGCAGAAAAAGCCCCGGCTAAC
TCCGTGCCAGCAGCCGCGGTAAGACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGAGTGCGTAGGCGGTTT
AGTAAGTTGGAAGTGAAAGCCCGGGGCTTAACCTCGGAATTGCTTTCAAAACTACTAATCTAGAGTGTAGTAGGGGATGA
TGGAATTCCTAGTGTAGAGGTGAAATTCTTAGATATTAGGAGGAACACCGGTGGCGAAGGCGGTCATCTGGGCTACAACT
GACGCTGATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGAT
ATCGGAAGATTCTCTTTCGGTTTCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCA
AAGGAATTGACGGGGGCTCGCACAAGCGGTGGAGCATGCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTG
ACATGGTGGTCGTGGATCGCAGAGATGCTTTTCTTCAGCTCGGCTGGACCACACACAGGTGTTGCATGGCTGTCGTCAGC
TCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATTCTTATTTGCCAGCGGGTAATGCCGGGAACT
ATAAGAAAACTGCCGGTGATAAGCCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACAC
GCGTGCTACAATGGTGTTTACAGAGGGAAGCAAGACGGCGACGTGGAGCAAATCCCTAAAAGACATCTCAGTTCGGATTG
TTCTCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGGCC
TTGTACACACTGCCCGTCACGCCATGGGAGTTAGTTTTACCTGAAGGTGGTGAGCTAACGCAAGAGGCAGCCAACCACGG
TAAAATTAGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATTACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-126 86.5
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-126 86.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-126 86.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-126 86.5
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-126 86.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-126 86.4