Gene Information

Name : fecA (PFLU1040)
Accession : YP_002870700.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : iron (III) dicitrate transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1150788 - 1153124 bp
Length : 2337 bp
Strand : -
Note : -

DNA sequence :
ATGCCCCAGCAACCGACGCTTCTCACCCGCACCTTGCGCCAACTCCTACTCGGCGCCAGCCTGAGTCTTACCGTACTGCC
GCCGGTGATGGCGGCCGATGCCAAGCCGTATCACATCGCCCCGACATCGCTGGAAGCTGCGTTGAACCAGTTTGGCCGCG
AAGCGGGCGTGCTGATTTCCTTCGGCTCCGAAGTTACGGCGGGTAGACAGAGCCGTGGCCTGTCCGGCAATTACAGCGCC
GCAGACGGCCTGCAAAAACTGCTGGAAGGCACCGGCCTGCAAGCCCGCGCCGAGGGCGACAATGCCTACAGCCTGCAACC
GGTCACGGCACCGGCCAGTATCGAATTGGGCACGTCCAGCGTGGTCGGCGACTGGCTCGGCGATGCGGCGCAAACCAACG
TATTCGAACACCCAGGCGCCCGTGATGTGATCCGCCGCGAAGAGTTCGAGCGTCAGGGCGCGACCCAGGCCAAGGACGTG
CTCAACCGCATCCCCGGCGTCAACGCACCGGACAACAACGGCACCGGCAGCCACGACATGGCGCTGAACTTCGGCATTCG
CGGCCTCAACCCGCGCCTGGCCTCGCGCTCCACGGTGTTGATGGACGGCATCCCGGTGCCTTTCGCGCCTTACGGCCAGC
CGCAGCTTTCATTCGCGCCGATCAGCATGGGCAACATGGATGCGGTAGACGTCGTACGCGGCGGCGGCGCTGTGCGCTAC
GGCCCGCAGAACGTCGGCGGCGTGGTCAACTTCGTGACCCGCGCGATCCCGGATGCGCCCACCGTCAAAGGCGGCCTGCA
GACCGAAACCAGCCCGTCCTCCAGCCACGACGGCTTCAAGACCACCGGCAACCTGCTCGCCGGCGGCACCGCCGACAACG
GCCTGGGCGGCGCGCTGCTGTACTCCGGCACCCGAGGCGGCGACTGGCGCGAGAACAGCAACACGCGCATTGACGACTTG
ATCCTCAAGGGTAAATACCAGCTCGATGATGCCAACAGCTTCAACGCCATGGCGCAATACTACGAAGGCCAGGCCGATAT
GCCCGGTGGTTTGAACGTCGCGGACTACAAGGCCGATCCGTATCAGTCCACCCGTCCCTACGACAAGTTCTGGGGCCGCC
GTACGATGTTCAACGTCGGCTATCGCTATGAGCATGACCGTCGCGAATTCACCGTGAACAGCTTCTTCACCAAGACGCTG
CGCAGCGGCTACCTCGACCAAGGCACGTTCCTGTCGCTGTCCCCGCGCGAGTACTGGGTGCGCGGCTTGGAAACCCGCTT
CGCCCAAGGCTTTGACCTGGGCCCGACCAGCCACGAAGTGGGCGTCGGCTACCGTTATATCAACGAGGCCGGCCACGAAC
TGCGCTACCGCACGCCGATTGCCGCCAACCAGCAAATCCCCACCACCGACAGCCGCAATGACCGCGACACCCGTGGCGGC
ACCGAGGCCAATGCTTTCTTCATCGATGACCGGATTGATATCGGCAAGTGGACCATCACCCCGGGCATTCGCTACGAGAT
GATCGAGTCCCAGCAAACCAACAACCTGAGCAACGTTAAATACAAGGGTGACTACAACACCGCGCTGCCGGCACTGAACG
TGCTTTATCACCTCACCGACGACTGGAACCTCTACGCGAACACCGAAGGTTCGTTCGGTAGCGTGCAGTACAGCCAGATG
CCCAACCGTGTGACCAGCGGCGAAGTCAAACCGGAAAAAGCGCGGACCTGGGAACTCGGCACACGCTACGACAACGGCAG
CCTGCGCGCGGAAATCGGCGCGTTCCTGATCAACTTCGACAACCAGTACGAAAGCAACCAGACCAATGATTCGGTGATTG
CCCGTGGTGAGACCCGTCACCAGGGCATCGAATCCAGCATCAACTACGCCCTCGACGGCTTGAGCCCGGCGCTGGCAGGG
TTCGATGTGTATGCCAGCTACGCTTACGTGGACGCCACCATCCGCGAAGACGGCCCGAACAAAGGCAACCGCGTGCCCTT
CTCGTCAAAACACAAGGGCACCCTCGGCGTGGGCTACACCGAAGGCCGCTGGAAGCTCAACCTGGACAGCAGCTACCAGA
GCAGCCAGTTCGCCGACAACGCCAACACCCAGGCCGAAAGCGCCGACGGTGCGAACGGGCGCATCCCCGGCTACATGCTG
TTCAGCAGCCGCGCCGCCTACGACTTCGGCCCGCAGCTGTCTGATTTGAACGTGGCGGTGGGAGTGAAAAACATCTTCAA
CAAGCAGTACTACACACGTTCATTCGACGATAACAACAAAGGCAAATACGTCGGTGAGCCACGCACGGTGTATGTGCAGA
CCTCCATCGCGTTCTAA

Protein sequence :
MPQQPTLLTRTLRQLLLGASLSLTVLPPVMAADAKPYHIAPTSLEAALNQFGREAGVLISFGSEVTAGRQSRGLSGNYSA
ADGLQKLLEGTGLQARAEGDNAYSLQPVTAPASIELGTSSVVGDWLGDAAQTNVFEHPGARDVIRREEFERQGATQAKDV
LNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY
GPQNVGGVVNFVTRAIPDAPTVKGGLQTETSPSSSHDGFKTTGNLLAGGTADNGLGGALLYSGTRGGDWRENSNTRIDDL
ILKGKYQLDDANSFNAMAQYYEGQADMPGGLNVADYKADPYQSTRPYDKFWGRRTMFNVGYRYEHDRREFTVNSFFTKTL
RSGYLDQGTFLSLSPREYWVRGLETRFAQGFDLGPTSHEVGVGYRYINEAGHELRYRTPIAANQQIPTTDSRNDRDTRGG
TEANAFFIDDRIDIGKWTITPGIRYEMIESQQTNNLSNVKYKGDYNTALPALNVLYHLTDDWNLYANTEGSFGSVQYSQM
PNRVTSGEVKPEKARTWELGTRYDNGSLRAEIGAFLINFDNQYESNQTNDSVIARGETRHQGIESSINYALDGLSPALAG
FDVYASYAYVDATIREDGPNKGNRVPFSSKHKGTLGVGYTEGRWKLNLDSSYQSSQFADNANTQAESADGANGRIPGYML
FSSRAAYDFGPQLSDLNVAVGVKNIFNKQYYTRSFDDNNKGKYVGEPRTVYVQTSIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecA YP_002870700.1 iron (III) dicitrate transport protein VFG1047 Protein 0.0 64