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Name : fecI (PFLU1042) Accession : YP_002870702.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 1154154 - 1154651 bp Length : 498 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGTCCCCGTTGAGCCCGTCCAACACCGTCGAAGTTTTGTACAACGACCACCACCGCTGGCTCACCGGCTGGTTGCGACG CAAGCTCGGCTGCCCGGAAAGTGCCGCCGACCTGGCACAGGACACCTTCATTCGCGTACTCACCGCACGGGAAACGCCCC CGTTGATCGAGCCCCGTGCGTTTCTCACCACCGTCGCCAAGCGCGTGCTGTTCAACTTCTACCGCCGCCAGGACCTGGAA CGCGCCTACCTCGACGCCTTGGCGCACATGCCCGAGCACGTCGCGCCGTCGGAAGAAGAACGCGCAATCATCCTGCAAAC CCTGGTGGAGCTGGATCAGCTGCTCGACGGCCTGCCCGTGCAGGTCAAACGCGCTTTCCTGCTGGCCCAGCTGGATGGCC TGACCTACGCACAAATCGGCGCTGAACTGGGCATCTCCATCGCCACCGTCAAACGCCACCTGAACAAAGCGGCCATGCGC TGCTATTTCGCCCTATGA Protein sequence : MSPLSPSNTVEVLYNDHHRWLTGWLRRKLGCPESAADLAQDTFIRVLTARETPPLIEPRAFLTTVAKRVLFNFYRRQDLE RAYLDALAHMPEHVAPSEEERAIILQTLVELDQLLDGLPVQVKRAFLLAQLDGLTYAQIGAELGISIATVKRHLNKAAMR CYFAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 6e-37 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fecI | YP_002870702.1 | RNA polymerase sigma factor | VFG1049 | Protein | 2e-37 | 51 |
