|
Name : cysB (PFLU1710) Accession : YP_002871348.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : transcriptional regulator CysB Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 1877690 - 1878664 bp Length : 975 bp Strand : + Note : LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes DNA sequence : ATGAAGCTCCAACAACTGCGCTACATCTGGGAAGTGGCGCACCACGACCTCAACGTTTCCGCTACCGCTCAAAGCCTTTA CACCTCGCAACCCGGTATCAGCAAGCAGATCCGCCTGCTCGAAGACGAGTTGGGCGTCGAAGTGTTCGCGCGCAGCGGCA AGCACCTCACCCGTGTCACGCCGGCCGGTGAGCGCATCATCACCACCGCTGGCGAGATCCTGCGCAAAGTCGAAAGCATC AAGCAGATCGCCCAGGAATTCTCCAACGAGAAGAAGGGCACGCTGTCCATCGCCACCACTCACACCCAGGCGCGTTATGC GTTGCCGCCGGTGATTCGCGATTTCATCAAGCAGTACCCTGACGTGGCCTTGCACATGCACCAGGGTTCGCCGATGCAGA TCGCCGAGATGGCCGCTGATGGCACCGTCGATTTCGCCATTGCCACCGAAGCCCTGGAGCTGTTCGGTGACCTGGTGATG ATGCCGTGCTACCGCTGGAACCGTTGCGTCGTCGTGCCTCAGGGTCACCCGTTGGCCAAGCTGCCGAAGCTGACCCTGGA AGCCCTGGCTGAATACCCGATCGTGACTTACGTGTTCGGCTTCACTGGCCGCTCCAAACTTGACGAAGCCTTCAGCCATC GCGGCCTGACGCCGAAAGTGGTGTTCACCGCCGCCGACGCCGACGTGATCAAGACTTACGTGCGCCTGGGCCTGGGCGTG GGGATCGTCGCCAAGATGGCGGTCGACACCGCACTCGACAAAGACCTGGTGGTGCTCGATGCCAGCGAGCTGTTCGAGTC CAGCGTGACCAAGATCGGCTTCCGTCGTGGCACGTTCCTGCGTGGCTTCATGTGCGATTTCATTGAGAAGTTTGCGCCGC ACCTCACCCGTGAGGTCATGGCCAAGGCGATCCAGTGCCACAACAAGCAGGAGCTGGAAGAGCTGTTCGACGGCGTAGAA CTACCGGTTCACTGA Protein sequence : MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVTPAGERIITTAGEILRKVESI KQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYPDVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVM MPCYRWNRCVVVPQGHPLAKLPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV GIVAKMAVDTALDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVMAKAIQCHNKQELEELFDGVE LPVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cbl | YP_853089.1 | transcriptional regulator Cbl | Not tested | PAI IV APEC-O1 | Protein | 2e-64 | 42 |
